Halomonas sp. DN3: NKF27_00775
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Entry
NKF27_00775 CDS
T10930
Symbol
ybiO
Name
(GenBank) mechanosensitive channel protein
KO
K22044
moderate conductance mechanosensitive channel
Organism
hadn Halomonas sp. DN3
Brite
KEGG Orthology (KO) [BR:
hadn00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
hadn02000
]
NKF27_00775 (ybiO)
Transporters [BR:
hadn02000
]
Other transporters
Pores ion channels [TC:
1
]
NKF27_00775 (ybiO)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MS_channel_TM1
MS_channel_2nd
MS_channel_1st
MS_channel_3rd
fvmX2
Motif
Other DBs
NCBI-ProteinID:
USZ50091
LinkDB
All DBs
Position
complement(165264..167639)
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AA seq
791 aa
AA seq
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MRSRLCSRLFSVLMLALVLLAGPAIAQQGGDASGSGGSSSDGPAYSTLADLLENEQARSQ
LIEQLRQMAENAPEQAQAAGEQAVDSAAEATLPKQLADMTSRVVSEFGNQFENLAAIFGG
MIDGALTEGELNFDLFTQAAINLGLVILATFVLFVIIRRLVRPLFTRLSQYSQNGQNLNP
TIRLVLCVVLAVIVDAAVVGLAYVGGNLAATFAIGETGSLSTRASLFLNAFLVIELLKAA
VRMLFASRYEGLRLLPITAPSASYWNRWIARLIGLTGYGLMVVVPLINTYLSYRVGEGIG
ALIMIGAYLYAITVVLINRSRLRDGLFDAAVRSSLSASRVALRLLGRIWHLLAITYFTVV
LVLTLTRPEDALPFVLIATLKTLGIVLAAMLVSRLLAQAIGRRITLSGELRKKLPLLEAR
LNSYVPTMLRAFNVLILIVAAMALLNAWGVFDMATWYASEAGRVLVSQVINVAIILIVAA
AVWIGLASLIEHKLNPTTGRGMPSARAQTLLSLFRNALAIAIVTMTAMIVLSEIGINIGP
LIAGAGVLGLAIGFGAQKLVQDIITGIFIQVENAMNTGDVVTLGGITGTAEKLSIRSVGI
RDLHGTYHLVPFSSVDVVSNYMRGFGYHVGEYGVAYRENVDEAIVALRNAFDELSSDEDL
KSEILEPLEVAGVIALADSSVNIRVRIKTTPGNQWAVGRAYNRLVKLHLDEAGIEIPFPH
TTIFFGEDKQGQAPAANLRLVEKDVVATGEARDTAPLPGEDGSIDSPREHETREDAETNA
KFKGDYDPDGN
NT seq
2376 nt
NT seq
+upstream
nt +downstream
nt
atgcgatcacgactctgctctcgactcttcagcgtgctgatgctcgcgctcgtgctgctc
gcgggacctgccatcgcccagcagggcggtgacgccagcggctctggcggttcctccagt
gacggtccggcctactcgaccctggccgacctgctggaaaacgaacaggcccgcagccag
ctgatcgagcaactgcgacagatggcggaaaacgcccccgagcaggcccaggccgccggt
gaacaggccgtcgacagcgccgccgaggctaccctgcccaagcaactggcggacatgacc
agccgcgtggtcagcgagttcggcaatcagttcgagaatctcgccgccatcttcggtggc
atgatcgacggcgccctgaccgaaggcgaactcaacttcgatctgttcacccaggcggcg
atcaacctcggcctggtgattctggcgacctttgtgctgttcgtgatcatcaggcgtctg
gtcaggccactgttcacgcggttgagccaatattcgcagaacggtcagaacctcaacccc
accatccgcctggtgctgtgcgtggtgctggcggtgatcgtggacgccgccgtggtgggt
cttgcctacgtcggcggcaacctggccgccaccttcgccatcggtgagacgggcagcctg
tcgacccgggcgtcgctgttcctcaatgccttcctggtcatcgagctgttgaaggcggcc
gtgcgcatgctgttcgcctcacgctatgagggcctgcgactgctgcccatcaccgctccc
agcgcgtcctactggaatcgctggatcgcccggctgattggccttaccggctacggcctg
atggtggtggtcccgttgatcaacacctacctgtcttaccgtgtcggtgagggcatcggc
gctctgatcatgatcggcgcctacctgtacgccatcaccgtggtgctgatcaatcgcagc
cgcctgcgcgatgggctgttcgatgctgccgtcaggtccagcctgtcggcctcccgtgtc
gcgctgcgcctgctcggccgcatctggcatctgctggcgattacctacttcaccgtggta
ctggtgctgaccctgacacgccccgaggacgccctgccgttcgtgctgatcgcgaccctc
aagaccctcggtatcgtgctggctgccatgctggtgtcgcgcctgctggcccaggccatc
ggtcgtcgcatcaccctgtccggtgagctgcgcaagaagctgccgttgctcgaggcacgc
ctcaactcctatgtcccgacgatgctgcgcgccttcaacgtgctgatcctgatcgtcgcc
gccatggccctgctcaacgcctggggcgtgttcgacatggccacctggtacgcctccgaa
gcgggtcgcgtgctggtcagccaggtgatcaacgtggccatcatcctgatcgtcgccgcg
gcggtctggatcggccttgccagcctgatcgaacacaagctgaatccgaccaccggccgc
ggcatgccctcggcccgggcccagacgctgctgtcgctgttccgcaatgccctggccatc
gccatcgtcaccatgacggcgatgatcgtgctgtcggaaatcggcatcaacatcggaccg
ctgatcgccggtgccggtgtgctcggtctggccatcggtttcggcgcccagaagctggtg
caggacatcatcaccggtatcttcatccaggtggaaaacgccatgaataccggcgacgtg
gtgaccctgggcggcatcaccggcaccgccgagaagctcagcatccgctcggtgggtatc
cgtgacctgcacggcacctaccatctggtgccgttctccagcgtcgatgtggtctccaac
tacatgcgtggcttcggctaccatgtgggcgaatacggcgtcgcctaccgcgagaacgtg
gacgaggccatcgtcgccctgcgcaacgccttcgacgaactgtcatccgacgaggacctc
aagtccgagatcctcgaacccctcgaggtggccggtgtcatcgccctggccgacagctcg
gtcaacatccgggtgcgcatcaagaccaccccgggcaaccagtgggcggtgggccgtgcc
tacaaccgtctggtcaagctgcacctggacgaggcgggcatcgagatccccttcccgcac
accacgatcttctttggcgaagacaagcagggccaggcgcccgccgccaacctgcgactg
gtcgagaaggatgtggtggcgaccggcgaagccagggataccgcaccgctgcccggcgag
gacggcagtatcgactcgccccgcgagcacgagacccgcgaggatgccgagaccaatgcc
aagttcaagggcgactacgaccccgacggcaactga
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