Halomonas sp. DN3: NKF27_01135
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Entry
NKF27_01135 CDS
T10930
Symbol
carB
Name
(GenBank) carbamoyl-phosphate synthase large subunit
KO
K01955
carbamoyl-phosphate synthase large subunit [EC:
6.3.5.5
]
Organism
hadn Halomonas sp. DN3
Pathway
hadn00220
Arginine biosynthesis
hadn00240
Pyrimidine metabolism
hadn00250
Alanine, aspartate and glutamate metabolism
hadn01100
Metabolic pathways
hadn01110
Biosynthesis of secondary metabolites
hadn01240
Biosynthesis of cofactors
Brite
KEGG Orthology (KO) [BR:
hadn00001
]
09100 Metabolism
09104 Nucleotide metabolism
00240 Pyrimidine metabolism
NKF27_01135 (carB)
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
NKF27_01135 (carB)
00220 Arginine biosynthesis
NKF27_01135 (carB)
Enzymes [BR:
hadn01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.5 Carbon-nitrogen ligases with glutamine as amido-N-donor
6.3.5.5 carbamoyl-phosphate synthase (glutamine-hydrolysing)
NKF27_01135 (carB)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CPSase_L_D2
CPSase_L_D1
CPSase_L_D3
MGS
ATP-grasp
Dala_Dala_lig_C
ATP-grasp_3
ATPgrasp_Ter
ATP-grasp_4
ATP-grasp_5
ATP-grasp_2
BamE
Motif
Other DBs
NCBI-ProteinID:
USZ50158
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All DBs
Position
249942..253172
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AA seq
1076 aa
AA seq
DB search
MPKRTDLKSILIIGAGPIVIGQACEFDYSGAQACKALREEGFRVILVNSNPATIMTDPAM
ADATYIEPITWQAVEKIIEAERPDAVLPTMGGQTALNCALDLDRHGVLEKYGVEMIGANA
DTIDKAEDRDRFDKAMKNIGLECPKAKVAHSMDEAWEIQGELGFPVIIRPSFTMGGSGGG
VAYNKEEFKEICGRGFELSPTHELLIDESLLGWKEYEMEVVRDKNDNCIIVCAIENFDPM
GVHTGDSITVAPAQTLTDKEYQIMRDASLAVLREIGVETGGSNVQFGVDPETGRMVVIEM
NPRVSRSSALASKATGFPIAKIAAKLAVGYTLDELQNDITGGRTPASFEPSIDYVVTKIP
RFTFEKFPQANDRLTTQMKSVGEVMAIGRTFQESLQKALRGMETGNDGLDPIVTEFSAEN
MALIKGELQAAGAERIFFIADAMRSGMSVEEVFELTNIDPWFLVQLEDLVKIEQDLSSRP
LSSLDARELYRLKRKGFGDARLAKVLGVSEDDVRRARHDAGIRPVYKRVDTCAAEFASDT
AYMYSTYEEECEAEVSDRKKIMVLGGGPNRIGQGIEFDYCCVHAAFAMRDDGYETIMVNC
NPETVSTDYDTSDRLYFEPVTLEDVLEIADKEKPVGVIVQFGGQTPLKLARALEAAGVPI
IGTTPDAIDRAEDRERFQQMIDKLGLKQPPNATARSFDEAFSKAEAIGYPLVVRPSYVLG
GRAMEIVYDASELENYMTHAVKVSNDSPVLLDHFLSAAIEIDIDAVSDGEQVVIGGIMQH
VEQAGVHSGDSACALPPYSLPAEVQDEMREQVKRMAVELGVKGLMNVQLAWQDGEIYVIE
VNPRASRTVPFVSKCIGTSLAQVAARCMAGVSLKEQGFEREIVPHFYSVKEAVFPFNKFP
GVDPILSPEMKSTGEVMGSGDTFAEAFYKAQLGAGEAIPALTGDRKAFLSVREPDKAGVI
EVARSLVTLGFTLCATRGTAAALEQAGLPVEVVNKVYEGRPHIVDSIKNDEIAYIVNTTE
GRQAINDSSVIRRTALARKVPYATTLAGASAVCLALEYGNAVTVRRLQELHAGANT
NT seq
3231 nt
NT seq
+upstream
nt +downstream
nt
atgcccaagcgtacagacctgaaaagcatccttatcatcggcgctggccccatcgtcatc
ggccaggcctgcgagttcgactattccggcgcccaggcctgcaaggcgctgcgcgaagag
ggttttcgcgtcatcctggtcaactccaacccggccaccatcatgaccgatccggccatg
gcggatgccacctacatcgagccgatcacctggcaggcggtggagaagatcatcgaggcc
gagcgtcccgacgccgtattgccgaccatgggaggccagaccgcgctgaactgcgcgctg
gatctcgatcgccacggcgtactggagaagtacggcgtggagatgatcggtgccaacgcc
gacaccatcgacaaggccgaggatcgcgatcgcttcgacaaggcgatgaagaacatcggc
ctcgagtgccccaaggccaaggtcgcccacagcatggatgaggcctgggagatccaggga
gagctgggcttcccggtgatcatccggccgtccttcaccatgggtggctccggtggcggc
gtggcctacaacaaggaagagttcaaggagatctgtgggcgcggcttcgagctttcgccg
acccacgagctgctgatcgacgagtcgttgctgggctggaaggaatacgagatggaggtc
gttcgtgacaagaacgacaactgcatcatcgtctgtgccatcgagaacttcgaccccatg
ggcgtgcacaccggtgattccatcaccgtggcgccggcccagacgctgaccgacaaggaa
taccagatcatgcgcgacgcatcccttgcggtgctgcgcgagatcggtgtcgagaccggc
ggctccaacgtccagttcggcgtggaccccgagaccggccgcatggtggtcatcgagatg
aacccgcgggtgtcgcgttcctccgccctggcctccaaggccactggctttccgatcgcc
aagatcgccgccaagctggcggtgggctacaccctggacgagctgcagaacgacatcacc
ggcggtcgcaccccggcgtcctttgagccgtccatcgactacgtcgtcaccaagattccg
cgcttcacctttgagaagttcccccaggccaacgaccgtctgaccacccagatgaagtcg
gtgggcgaggtcatggcgatcggccgtaccttccaggagtcgctgcagaaggcgctgcgt
ggcatggagaccggcaacgacggtctcgatcccatcgtcaccgagttcagcgccgagaac
atggcgctgatcaagggcgagttgcaggccgccggcgccgagcgcatcttcttcatcgcc
gatgccatgcgctccggcatgtcggtggaagaagtgttcgagctgaccaacatcgacccc
tggttcctggtccagctcgaggatctggtcaagatcgagcaggatctgtccagccgtccg
ctgtcgtcgctggacgcgcgcgaactctatcgtctcaagcgcaagggctttggcgatgct
cgcctggccaaggtgctgggcgtgtccgaggacgatgtgcgcagggcgcgccatgacgcc
ggtatccgtccggtctacaagcgcgtcgacacctgcgccgccgagttcgcctccgacacc
gcctacatgtactccacctacgaggaggagtgcgaggccgaggtcagcgatcgtaagaag
atcatggtgctgggcggtggccccaaccgtatcggtcagggcatcgagttcgactactgc
tgcgtccacgccgccttcgccatgcgcgacgacggctacgagaccatcatggtcaactgc
aacccggagaccgtgtccaccgactacgacacctccgatcgtctgtacttcgagccggtg
accctggaggacgtgctcgagatcgccgacaaggagaagccggtcggggtgatcgtgcag
ttcggcggtcagacgccgctgaagcttgcacgtgcgctcgaggccgccggtgtgccgatc
atcggtaccaccccggacgccatcgaccgcgccgaggatcgcgagcgcttccagcagatg
atcgacaagctgggcctcaagcagccgcccaacgccaccgccagaagctttgacgaggcc
ttcagcaaggccgaggcgatcggctacccgctggtggtgcgcccgagctacgtgctcggt
gggcgcgccatggaaatcgtctatgacgccagcgagctggagaactacatgacccacgcg
gtcaaggtctccaacgactcgccggtgctgctcgatcacttcctgagcgccgctatcgag
atcgacatcgacgcggtgtccgacggtgagcaggtggtgatcggcggtatcatgcagcac
gtcgaacaggctggtgtgcactcaggcgactccgcctgtgcgctgccgccgtactcgctg
ccggcggaagtgcaggacgagatgcgcgagcaggtcaagcgcatggccgtggagcttggc
gtgaagggcctgatgaacgtccagctggcctggcaggacggcgagatctacgtcatcgag
gtcaacccgcgcgcctcgcgcaccgtgcccttcgtgtccaagtgcatcggtacctcgctg
gcccaggtggcggcccgttgcatggccggcgtcagcctcaaggagcagggcttcgagcgc
gagatcgtgccgcacttctacagcgtcaaggaagcggtgttcccgttcaacaagttccct
ggcgtcgatccgatcctgtcgccggagatgaagtccaccggcgaggtgatggggtccggc
gacaccttcgccgaggccttctacaaggctcagctcggtgcaggtgaggcgattccggcg
ctgaccggcgatcgcaaggcgttcctgtcggttcgcgaaccggacaaggcgggtgttatc
gaagtggcgcgttctctggtaacattgggcttcacactctgtgcgacccgaggaacggcg
gcagcccttgaacaggctggtctgcccgtcgaggtcgtcaacaaggtttacgaaggccgg
ccacacatcgtcgattccatcaagaacgacgagatcgcctatatcgtcaataccaccgag
ggccgccaggccatcaatgactcctcggtgatccgccgcaccgcactcgcccgcaaggtt
ccctatgccacgacgctggcaggggccagtgccgtttgtttggcgctcgagtacggcaat
gccgtgaccgtgcggcggctacaggaactgcatgcaggagcgaatacatga
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