KEGG   Halomonas sp. DN3: NKF27_03910
Entry
NKF27_03910       CDS       T10930                                 
Symbol
tssM
Name
(GenBank) type VI secretion system membrane subunit TssM
  KO
K11891  type VI secretion system protein ImpL
Organism
hadn  Halomonas sp. DN3
Pathway
hadn03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:hadn00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    NKF27_03910 (tssM)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:hadn02044]
    NKF27_03910 (tssM)
Secretion system [BR:hadn02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   NKF27_03910 (tssM)
SSDB
Motif
Pfam: IcmF-related_N OmpA IcmF-related AAA_16
Other DBs
NCBI-ProteinID: USZ50658
LinkDB
Position
852106..854574
AA seq 822 aa
MIKRLSLLLRKYRTYAMALAFFAMIFVIWGLGVWWGFSSLGSVLAGILFFLVASALYLLL
LYRGVDRQDEVESALIQSADDAVLGASPEDREEVSLLRERLLEALERMKKGDGGKGRKRD
LLYRLPWYLVIGQPAVGKSTLVYRSGLDFPFADREHARIAGVGGTRHCDWFFSSEAVLLD
SAGRYTASEEDASRWRALLGLLRQHRPRRPLNGLIVAVSIDELIGRPAPERESLVLRLRE
RLQETYDQLGTVVPIYLVFTKSDLIPGFRQFHRQLAPTERDEVLGWTFAHQDFETANWAG
RFGEALDGLVKRCRTIGEQRLVEGDMIHTRDDPAALEFPLELRALAPLLSSFAGSLLKAN
PYQSSPLLRGFYFTSALADGQPAMGEHARAVESRFGLAASRGVTAPQDGKSLFVTGLFSQ
VILPDQHLVGLYSGPNRERRRQLRWCWVALALAAVMVSGWALSFSRNADELAAIDTSLAE
ARVADGQHLDGYTRWEALDALRVGVAHYVERDEQGAPWSLGMGLYHGDDISPALRKAYFD
EIERSMLRPVADNLGQALYTLPTIPVYRSGESERITAIDLPNVEPNARPADNSPQALADF
GNAALGTYVELSRTPRPKVSEALLRQRLPDYWYPAISAHDTGERDPRDLDFASRQIAFYA
RQIQAPDVPRIDDNSFLISSSRNYIDGLLDHSLRTLETITLESDTLFSFGRADFAGLQAA
GQQQLNRIAERLVNTPGIGRITITGHADQIGSAQTNKRLSLERAQTVRTYLIGKGVTPEM
VEAVGAGSERPLVQCESQLGRSERIRCLAPNRRVEIAVRASS
NT seq 2469 nt   +upstreamnt  +downstreamnt
gtgatcaagcgactgtcactgttactgcgcaagtaccgcacctatgccatggcgctggcc
tttttcgcgatgatcttcgtgatctggggactgggcgtgtggtgggggttctcctctctg
ggcagcgtgctggctggcatcctgttctttctggtggcctcggcactgtatctgctgctg
ctctaccgcggcgtggatcgccaggacgaggtggaatccgcgctgatccagagcgccgat
gacgccgtgctgggcgcctcgccagaggaccgcgaagaggtcagcctgttgcgcgagagg
ttgctggaagcgctggagcgaatgaagaagggtgatggtggcaaggggcgcaagcgcgat
ctgctctatcggttgccgtggtatctggtcatcggccagccggcggtgggcaagagcacc
ctggtctaccgctccggtctcgattttcccttcgccgaccgcgagcacgcgcggatcgcc
ggcgtcggcggcacccgacactgtgactggttcttcagcagcgaggcggtgctgctcgac
tcggccggtcgctataccgcctctgaagaggacgcctcgcgctggcgggcccttcttggc
ctgctgcgccagcatcgcccgcggcggccgctcaatggcctgatcgtggcggtcagcatc
gacgagttgatcggtcgtcctgcccccgagcgtgagtcgctggtgctaaggctgcgcgag
cgcctgcaggaaacctacgatcagctcgggaccgtggtgccgatctacctggtgttcacc
aagagcgacctgattcctggttttcgccagttccaccgccagctggcaccgacagagcgt
gacgaagtgctgggctggacctttgcccaccaggacttcgagacggctaactgggccggg
cgttttggcgaagctcttgatggcctggtgaagcgctgtcgcaccatcggcgagcagcgc
ctggtcgagggcgacatgatccacacccgcgacgatcctgcggcgctggagtttccgctg
gagttgcgtgccctggcgccattgttatccagctttgccgggtccctgctcaaggccaac
ccctatcagagctcaccgctgctgcggggcttctacttcaccagtgcgctggccgatggt
cagcccgccatgggcgagcatgcccgggcggtggagagtcgctttgggcttgccgccagt
cgcggtgtcacggctccccaggacggcaagagcctgttcgtgaccggcctgttctcccag
gtgatcctgcctgaccagcatctggtcggactctacagcggtcccaatcgggagcgtcgg
cgccagctacgctggtgctgggtggctctggcgctggcggcggtgatggtcagcggctgg
gcgctgtcgttctcgcgtaacgccgacgaactcgccgccatcgacaccagcctggccgag
gcgcgagtggccgatggccagcacctcgacggctacacccgctgggaagcgctggacgcc
ctgcgtgtcggcgtcgcccactacgtcgagcgcgacgagcaaggcgcgccctggtcgctg
gggatgggcttgtaccacggcgatgacatctcgccggcgctgcgcaaggcctacttcgac
gagatcgagcgcagcatgctgcgcccggtggccgacaacctgggccaggcgctctacacc
ctgccgaccataccggtgtatcgctcgggggaatccgaacgcatcacggcgatcgacctg
cccaatgtcgagcccaacgcgcgtcctgccgacaacagtcctcaggcgctggccgacttc
ggcaatgcggccctcggcacctacgtggagctgtcgcgtaccccaaggcccaaggtctcc
gaggcgctgctgcgccagcgcctgccggactactggtacccagcgatcagcgcccatgac
acaggcgagcgcgatcctcgggatctcgactttgccagtcgtcagatcgccttctatgca
cgccagatacaggcaccggacgtgccacgcatcgacgacaactcgtttctgatctcgtcg
agccgcaactatatcgacggcctgctggatcactccttgcgcacgctggagaccatcacc
ctggagtcggacaccttgttctcctttggtcgtgccgactttgccggtctgcaggcggcg
gggcagcagcagctcaaccggatcgccgaacgcctggtcaacacccccggtatcgggcgc
atcaccatcaccggacacgccgatcagatcggttctgcgcagaccaacaagcgtctatcg
ctcgagcgcgcccagaccgtgcgcacctacctgatcggcaagggagtcacacccgagatg
gtcgaggccgtcggtgccggcagcgagcgccccctggtgcagtgcgaatcacaacttggc
cgcagcgaacggattcgctgtctggcccccaatcgtcgggtggagatcgccgtgcgtgcc
tcgagctga

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