Halomonas sp. DN3: NKF27_04065
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Entry
NKF27_04065 CDS
T10930
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
hadn Halomonas sp. DN3
Pathway
hadn00260
Glycine, serine and threonine metabolism
hadn00460
Cyanoamino acid metabolism
hadn00630
Glyoxylate and dicarboxylate metabolism
hadn00670
One carbon pool by folate
hadn00680
Methane metabolism
hadn01100
Metabolic pathways
hadn01110
Biosynthesis of secondary metabolites
hadn01120
Microbial metabolism in diverse environments
hadn01200
Carbon metabolism
hadn01230
Biosynthesis of amino acids
hadn01240
Biosynthesis of cofactors
hadn04981
Folate transport and metabolism
Module
hadn_M00975
Betaine degradation, bacteria, betaine => pyruvate
Brite
KEGG Orthology (KO) [BR:
hadn00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
NKF27_04065
09102 Energy metabolism
00680 Methane metabolism
NKF27_04065
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
NKF27_04065
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
NKF27_04065
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
NKF27_04065
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
NKF27_04065
Enzymes [BR:
hadn01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
NKF27_04065
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Motif
Pfam:
SHMT
Aminotran_1_2
Beta_elim_lyase
DegT_DnrJ_EryC1
Motif
Other DBs
NCBI-ProteinID:
USZ50688
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Position
899517..900824
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AA seq
435 aa
AA seq
DB search
MPSAHLSSSSLSRFDPQIAEAIADEVVRQQDHVELIASENYASPAVMEAQGTQLTNKYAE
GYPGKRYYGGCEHVDVVERLAIERACALFSADYANVQPHSGAQANAAAFMALVSPGDTVL
GMSLAHGGHLTHGAAPNFSGKHYHAVQYGLDEATGQIDYAEVECLAREHRPKLIVAGFSA
YSQVVDWRRFRAIADSVGAWLLVDMAHVAGLVAAGLYPSPLPHAHVVTTTTHKTLRGPRG
GLILSASGDEALYKKLNGAVFPGQQGGPLMHVIAAKAVAFREAMNQDFVRYQERVIANAK
AMAETFLERGYDVVSGGTEDHLFLVSLIRQGVTGKDADAALGRSHITVNKNAVPGDPQSP
FVTSGLRIGTPAVTTRGFDAEECERLADWICDVLDVLARGDDTAAIEADVRQRVGELCAR
HPVYPAPRQAAAEPA
NT seq
1308 nt
NT seq
+upstream
nt +downstream
nt
atgcccagcgctcatctgtccagctcgtcactgtcccggttcgatccgcagatcgccgag
gccatcgccgacgaggtcgttcgccagcaggatcatgtggagctgatcgcctcggaaaac
tacgccagtcccgcggtgatggaggcccagggcacccagctgaccaacaagtacgccgag
ggctatcccggtaagcgctactacggcggctgcgagcacgtcgacgtggtggagcggctg
gccatcgagcgggcctgcgcgctgttcagcgccgactacgccaacgtgcagccccacagc
ggtgcccaggccaatgccgccgccttcatggcactggtatcccccggcgataccgtgctc
ggcatgagcctggcccacggcggccacctgacccacggcgcggcaccgaacttctccggc
aagcactaccacgcggtgcagtatggtctggacgaggccaccggccagatcgactacgcc
gaggtcgagtgtctggccagggagcatcgccccaagttgatcgtcgccggcttctcggcc
tactcccaggtggtcgactggcgccgctttcgcgccatcgccgacagcgtcggcgcctgg
ctgctggtggacatggcccacgtcgccggtctggtggcggccgggctctatccaagcccg
ctgccccacgcccacgtggtcaccaccaccacccacaagaccctgcgcggaccgcgcggt
ggcctgattctgtccgccagcggtgacgaggcgctgtacaagaagctcaatggcgcggtc
ttccccggccagcagggcggtcccctgatgcatgtcatcgcggccaaggcggtagccttc
cgcgaggccatgaatcaggactttgtgcgctaccaggagcgggtcatcgccaatgccaag
gccatggccgagacctttctcgagcgcggctacgacgtggtctccggtggcaccgaagac
catctgtttctggtctcgctgatccgccagggcgtcaccggcaaggacgccgacgcggcc
ctgggtcgctcgcacatcaccgtcaacaagaatgcggtaccgggcgacccgcagagcccc
ttcgtcacctcgggcctgcgcatcgggaccccggcggtgaccacccgaggcttcgatgcc
gaagagtgcgagcggcttgccgactggatctgcgatgtgctggatgtgctggcccgtggc
gacgacaccgccgccatcgaggccgacgtacgccagcgggtcggcgagctatgcgcgcgt
cacccggtctatccggcgcctcggcaagccgctgccgagccggcctga
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