Halomonas sp. DN3: NKF27_04330
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Entry
NKF27_04330 CDS
T10930
Symbol
rpoS
Name
(GenBank) RNA polymerase sigma factor RpoS
KO
K03087
RNA polymerase nonessential primary-like sigma factor
Organism
hadn Halomonas sp. DN3
Brite
KEGG Orthology (KO) [BR:
hadn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hadn03021
]
NKF27_04330 (rpoS)
Transcription machinery [BR:
hadn03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
NKF27_04330 (rpoS)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r3
Sigma70_r4
Sigma70_r1_2
Sigma70_r4_2
FlaC_arch
Motif
Other DBs
NCBI-ProteinID:
USZ51936
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All DBs
Position
952441..953436
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AA seq
331 aa
AA seq
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MLERDLQDVNLETVDEADEDAVEDVTDEVEEVEEADDETQAFEKALGREDRYARQSLDAT
QIYLNEIGFSPLLTPEEEVYFGRLARKGDPQGRARMIESNLRLVVKIARRYLNRGLTLLD
LIEEGNLGLIRAVEKFDPERGFRFSTYATWWIRQTIERALMNQTRTIRLPIHVVKELNIY
LRAARELTQKLDHEATAEEIAEHLDKPVETVKKMMGLNERVSSVDYPMGGESDKPLIETL
TDDNEQGPESTLVDGDVKAHVNHWLAELTEKQCEVVVRRFGLRGHEAATLEQVGEEIGLT
RERVRQIQVEALKKLRRMLDKQGLSLDAIFE
NT seq
996 nt
NT seq
+upstream
nt +downstream
nt
atgcttgaacgggatcttcaggatgtgaatctcgaaacggtagacgaggctgacgaggac
gccgtcgaggacgtgacggacgaggtcgaagaggtcgaggaagccgacgacgagactcag
gcgttcgagaaggcgctgggtcgcgaggatcgctatgcgcgccagagcctcgacgccacc
cagatctacttgaatgagatcggcttctcgccattgctgacgccggaggaagaggtctat
ttcggccgtctggcgcgcaagggtgacccccaggggcgggctcggatgatcgagtccaac
ctgcgcctggtggtgaagatcgcgcgccgctacctcaatcgcggcctgaccctgctggac
ctgatcgaagagggcaacctcggcctgattcgtgcggtggagaagttcgatccggagcgc
ggctttcgcttttcgacctacgccacctggtggattcgccagaccatcgaacgggcgctg
atgaatcagacccgcacgattcgcctgccgatccacgtggtcaaggaactcaacatctac
ctgcgcgccgcccgtgagctgacccagaagctcgatcacgaggccaccgccgaagagatc
gccgaacatctggacaagcccgtcgagaccgtcaagaagatgatggggctcaacgaacgg
gtgtcctcggtcgactaccccatgggcggcgagagcgacaagccgttgatcgagaccctc
accgacgacaacgagcaggggcccgagtcgacgttggtcgacggtgacgtcaaggcccac
gtcaatcactggctggcggagcttaccgagaaacagtgcgaggtggtggtgcgacgcttt
ggccttcgtggccacgaggccgccaccctggagcaggtcggcgaggagatcggcctgacc
cgcgagcgggtgcgccagatccaggtcgaggcgctcaagaagctgcgccggatgctcgac
aagcagggcctgtcgctggacgccatcttcgagtag
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