KEGG   Halomonas sp. DN3: NKF27_04440
Entry
NKF27_04440       CDS       T10930                                 
Symbol
ribD
Name
(GenBank) bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD
  KO
K11752  diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
Organism
hadn  Halomonas sp. DN3
Pathway
hadn00740  Riboflavin metabolism
hadn01100  Metabolic pathways
hadn01110  Biosynthesis of secondary metabolites
hadn01240  Biosynthesis of cofactors
hadn02024  Quorum sensing
Module
hadn_M00125  Riboflavin biosynthesis, plants and bacteria, GTP => riboflavin/FMN/FAD
Brite
KEGG Orthology (KO) [BR:hadn00001]
 09100 Metabolism
  09108 Metabolism of cofactors and vitamins
   00740 Riboflavin metabolism
    NKF27_04440 (ribD)
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    NKF27_04440 (ribD)
Enzymes [BR:hadn01000]
 1. Oxidoreductases
  1.1  Acting on the CH-OH group of donors
   1.1.1  With NAD+ or NADP+ as acceptor
    1.1.1.193  5-amino-6-(5-phosphoribosylamino)uracil reductase
     NKF27_04440 (ribD)
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.4  In cyclic amidines
    3.5.4.26  diaminohydroxyphosphoribosylaminopyrimidine deaminase
     NKF27_04440 (ribD)
SSDB
Motif
Pfam: RibD_C dCMP_cyt_deam_1 MafB19-deam Inv-AAD
Other DBs
NCBI-ProteinID: USZ50757
LinkDB
Position
978436..979596
AA seq 386 aa
MNPTDITAGQDEAWMARALKLAERGRYTTMPNPRVGCVLVKHGKHLADGYHQRAGEPHAE
VHALEAAGEHARGATAYVTLEPCSHQGRTGPCCDALIKAGVARVVVAMQDPNPQVAGRGI
ARLRDAGVEVRLGCLEADAQVLNAGFVSRMTRGRPRVSLKLAMSLDGRTAMASGESQWIT
GAEARRDVQRLRAQSCAILTGVDSIIFDNSRLTVRADQLGLDDAEVIARRQPLRVVVDSR
LRMPLAAACLSEPGETLVVCVEGSESPRRDALMRSGARVLEMPAGDDGRVDLGALLKWLG
DEGGCNELLVETGATLAGALMDACQVDELRLYMAPTLLGSDARGLMALSGIERMAEQRPL
EILDIRALGKDWRILARPALAACAEH
NT seq 1161 nt   +upstreamnt  +downstreamnt
atgaatccgacggacatcacggcaggccaggatgaagcctggatggccagggcattgaag
ctggccgaacgcggtcgctacaccaccatgcccaatccgagggtcggctgcgtactggtc
aagcacggcaagcatctggccgacggctaccatcagcgcgccggggagccccacgccgag
gtccatgcactcgaggctgccggtgagcacgcccgaggcgccaccgcttacgtgacgctg
gaaccctgctcccaccaggggcgcacagggccttgctgcgatgccttgatcaaggccggt
gtcgccagggtggtggtagccatgcaggatcccaatcctcaggtggcgggacgcggtatc
gcacgcctgcgtgacgccggggtcgaggtaaggctgggttgcctcgaggcggacgcccag
gtattgaacgccggcttcgtgtcgcgcatgacccgggggcgtccacgggtcagcctcaag
ctcgccatgagcctcgacggccgtaccgccatggcctccggcgagtcccagtggatcacc
ggtgccgaggctcggcgtgacgtccagcggctgcgggctcagagctgcgccatcctcacc
ggggtggattcgatcatcttcgacaactcgcggctgacggtgcgtgccgatcagctcggg
ctcgatgacgccgaagtcatcgcccgacgccagccgcttagggtcgtggtggactcgcgc
ctgcgcatgccgctggccgcggcctgcctgagcgagccaggggagacgctggtggtctgc
gtcgagggcagcgaatcccctcgcagagacgcgctgatgcgctccggcgcgcgggtgctg
gagatgcctgcaggcgacgacggccgcgtcgatcttggcgcgctgctcaagtggctcggt
gacgagggcggctgcaacgagcttttggtggagaccggcgcgaccctggcaggtgccttg
atggatgcctgtcaggtggacgagttgcgtctttacatggcgccgaccctgctcggctcc
gacgcgcgcgggctgatggcgttgtcgggtatcgaacgcatggccgagcaacggcctctg
gaaattctcgatatccgcgccctcggcaaggactggcgtattctggcgcgcccggcgctg
gccgcctgcgccgagcactga

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