Halomonas sp. DN3: NKF27_04925
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Entry
NKF27_04925 CDS
T10930
Symbol
orn
Name
(GenBank) oligoribonuclease
KO
K13288
oligoribonuclease [EC:3.1.-.-]
Organism
hadn Halomonas sp. DN3
Pathway
hadn03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
hadn00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
NKF27_04925 (orn)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hadn03019
]
NKF27_04925 (orn)
03009 Ribosome biogenesis [BR:
hadn03009
]
NKF27_04925 (orn)
Messenger RNA biogenesis [BR:
hadn03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
NKF27_04925 (orn)
Ribosome biogenesis [BR:
hadn03009
]
Eukaryotic type
Pre-60S particles
RNases
NKF27_04925 (orn)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Motif
Other DBs
NCBI-ProteinID:
USZ51938
LinkDB
All DBs
Position
1095963..1096472
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AA seq
169 aa
AA seq
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MTGLDPERERIIEVATLVTDGELNVIAEGPVIAVHQSDALLSGMDEWNTRTHGNSGLVER
VRKSQIDTREAERRTLEFLSAHVAPGTSPMCGNSIHQDRRFLEREMPELWAFFHYRNLDV
STLKELAKRWNPQALEGFSKRNVHLAMDDIKESIAELAHYRKTFLKAGE
NT seq
510 nt
NT seq
+upstream
nt +downstream
nt
atgaccgggctcgacccggagcgtgaacgcatcatcgaggtggccaccctggtcaccgac
ggcgagctcaatgtcatcgccgaggggccggtgatcgcggttcaccagagcgacgcactg
ttgtccggcatggatgagtggaatacccgtacccacggcaattccgggctggtcgagcgg
gtgcgcaagagccagatcgatacccgcgaggccgagcgcaggacgctcgagtttctctca
gcccacgtggccccgggaacgtcgccgatgtgcggcaactcgatccaccaggaccggcgc
tttctggagcgcgagatgcccgagctgtgggcatttttccactaccgcaatctcgacgtc
tcgaccttgaaggagctggccaagcgctggaacccccaggcgctggagggcttttccaag
cgcaacgtgcacctggccatggacgacatcaaggaatccatcgccgaactcgcgcactat
cgcaagacgttcctcaaggctggggaatag
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integrated database retrieval system
