Halomonas sp. DN3: NKF27_05410
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Entry
NKF27_05410 CDS
T10930
Name
(GenBank) spermidine/putrescine ABC transporter substrate-binding protein
KO
K11069
spermidine/putrescine transport system substrate-binding protein
Organism
hadn Halomonas sp. DN3
Pathway
hadn02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
hadn00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
NKF27_05410
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
hadn02000
]
NKF27_05410
Transporters [BR:
hadn02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Spermidine/putrescine transporter
NKF27_05410
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_8
SBP_bac_1
SBP_bac_6
SBP_bac_11
Lipoprotein_8
Motif
Other DBs
NCBI-ProteinID:
USZ50942
LinkDB
All DBs
Position
1219523..1220581
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AA seq
352 aa
AA seq
DB search
MQRWMAVAALGMVSTGVWAQDDDKLFLFNWTEYMDPALVEAFEQEFGVEVVQNYFTSNAE
MFSKLAAGGDAQYDVVVPTDYYVTRLIDAGLVRELDDPRIQQGREDLMEAFRQPPYDPEE
RYSVPYLWGVTGIVYDTNTFAELPHSWSVLFDPEINPDQPFALLGGDPQVSLGMACAYQG
AGFDCVGQEAWINAAKLVSQTLERGNFTGFVDSTAAVEQVARGVSAVAVTYSGDVDYRKA
DSPEIYGDLAFFAPEEGAQLGMDTFVVPARAPHPQLAQDFISFMMRPENAAKAANYAYYR
TPNEAALPMVDEALREASRLDPETSGHLVTTPLIEGESLTMLQQLWTEVRSR
NT seq
1059 nt
NT seq
+upstream
nt +downstream
nt
atgcaacgatggatggcggtggcagcactgggcatggtcagtaccggtgtctgggcgcag
gatgacgacaagctgtttctgttcaactggaccgagtacatggacccggcgctggtcgag
gccttcgagcaggagttcggggtggaggtggtgcagaactacttcacctcaaacgccgag
atgttctccaagctggccgccggtggcgacgctcaatacgacgtggtggtgcccaccgac
tactacgtcacccggctgatcgacgccggcctggtgagggagctcgacgacccgcgcatc
cagcaggggcgagaggatctgatggaagccttccgtcagccgccctatgaccccgaagag
cgctacagcgtgccctacctgtggggcgttaccggtatcgtctacgacaccaacaccttc
gccgagctgccgcactcctggagcgtgctgttcgaccccgagatcaatcccgaccagccc
ttcgcgctgctgggtggcgatccccaggtatcactcggcatggcctgtgcctaccaggga
gctgggttcgactgcgtcggtcaggaggcctggatcaacgccgccaagctggtcagccag
accctggaacggggcaacttcaccggtttcgtcgacagtaccgcggcggtggagcaggtg
gcacgaggcgtcagtgcagtggcggtgacctacagcggcgacgtggactaccgcaaggcc
gattctcccgagatctatggtgatctggctttcttcgccccggaggaaggcgcccagctc
ggcatggacaccttcgtggtgccggcgagagccccccatccccaattggcccaggacttc
atcagctttatgatgcgtccggaaaatgccgccaaggcggcgaactatgcctactacaga
acccccaacgaggctgccctgccgatggtcgacgaggcactgcgagaggcctccaggctc
gatcccgagaccagcggtcacctggtgaccacgccgctgatcgagggggaatcgctgacc
atgctgcagcagctatggaccgaggtgcgctcacgttga
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