Halomonas sp. DN3: NKF27_05570
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Entry
NKF27_05570 CDS
T10930
Name
(GenBank) AAA family ATPase
KO
K03546
DNA repair protein SbcC/Rad50
Organism
hadn Halomonas sp. DN3
Brite
KEGG Orthology (KO) [BR:
hadn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hadn03400
]
NKF27_05570
DNA repair and recombination proteins [BR:
hadn03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
NKF27_05570
Archaeal homologous recombinant proteins
NKF27_05570
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SbcC_Walker_B
AAA_29
SMC_N
AAA_21
FKBP15
ABC_tran
nSTAND3
RsgA_GTPase
cobW
AAA_22
Motif
Other DBs
NCBI-ProteinID:
USZ50972
LinkDB
All DBs
Position
complement(1258913..1262227)
Genome browser
AA seq
1104 aa
AA seq
DB search
MKILALRLSQLASLPGPVELDFTAAPLADAGLFAITGPTGAGKSTLLDALCLALFGNTPR
LRHAPGRDSHLDDLDGSRIATADPRSLLRRGAASGYAEVDFIGRDARRYRARWAVRRARD
KADGKLQAVEQSLTDLDDERLLTAQKREFAELIPECLGLSFEQFTRAVLLAQSEFAAFLK
ADDNARSDLLEKLTNTQEYSRISVESYARAKEARDAVARQQALLAEDAPSDDTARQAMEQ
ELAEAEGELDTCQRQMKALDEEAQWLAQDAQWRQRCEQADASLVEAEAQWEALSEQRREC
EMLERVAPWRPQLLRQRSLSRQLPDQRHQLEQAKSALAQARTALEQQHQQTSRRRQTLED
SEQALEQARPAIAQAREIASELKGREQQHRQLEDEHQKRKRQREDLDGQQRALAERHRRH
LEQRDAATRTLSRHLGQHQQVATARAEAQQHLEDAGHRLLALSELEQRWRLLHQLDEQQR
RLDAERRRDSAQRDELLDQGKQARARLDHASAEHEQLTRFIQRARATRSDSVADMRATLE
PDTACPVCGSHEHPWRDSPPATPEATQLAAQIALEDEQLAVSESRLGELREQRDALFGRF
QALKASVEQAEASLLALEPRRNEAQAGLEEAQARLDDPALAEQWRALDAEARQAWLTEHS
DKARQRQQQARERLQALDDAERQLAPLAEAIEDDERERQALALRAANFDEELKRLDDQRP
ELTRSIDEHRRRLAEALGDDRSADAWLERLEAQVRQARQDHEQARQAHDQAQRQVLSLTQ
RIEHEGKALSVLEDEKTRLDAELERWRSEHPDITDGDLERLLDQADDALKALRARLDGAR
EACQTARTSRDERRQGWRAWRARHLPEQDPQTLLDEATQRQLDARQADLDARREANRPRL
EAAQQRRDGALHAVRDDDRRRQRQRDGLEALERARAEHHRWGRIAELIGAADGKTFRRIA
QAWNLERLIDEANVHLAGLSRRYRLVRGGSPLGLLVIDQDVADERRSVHSLSGGETFLVS
LAMALGLASLASGELAIESLFIDEGFGSLDPQSLALAMDALDGLQAQGRRVGVISHVQEM
HERIPVQIQVHPAGNGESRVALSD
NT seq
3315 nt
NT seq
+upstream
nt +downstream
nt
atgaagattctcgccctgcgcctgtcccaactggcctccctgcccggtccggtcgagctg
gactttaccgcggcgccactggccgatgccggcctgttcgccatcaccggccccaccggc
gccggcaagagcaccctgctcgacgccctgtgcctggcgctgttcggcaatacgcccagg
cttcgccacgccccggggcgcgactcccatctggacgacctggacggctctcggatcgcc
accgccgacccccgcagcctgctgcggcgcggcgccgccagcggctacgccgaggtcgac
ttcatcggccgcgacgctcgccgttaccgcgcacgatgggccgtgcggcgcgcccgggac
aaggccgacggcaagctgcaggcggtggagcaatcgttgaccgacctggacgacgaacgc
ctgctgaccgcccagaagcgcgaattcgccgagctgatccccgagtgcctggggctatcg
ttcgagcagttcacccgcgccgtgctgctggcccagagcgagttcgcggcctttctcaag
gccgacgacaacgcccgctcggacctgctcgagaagctcaccaacacccaggaatactcg
cgcatctcggtcgaaagctacgcccgggccaaggaggcccgcgacgcagtggcccgccag
caggcgctgctcgccgaggacgcccccagcgacgacaccgcacgccaggccatggagcag
gaactggccgaggccgaaggcgagctggacacctgccagcggcagatgaaggcgctggac
gaagaggcccagtggctcgcccaggacgcccagtggcgccagcgctgcgaacaagccgac
gccagcctggtcgaggcagaggcccagtgggaggcactgagcgagcagcgccgtgagtgc
gagatgctcgagcgcgtcgcaccctggcgcccccagttgctgcgccagcgtagcctttct
cgacagttgccggaccagcgccaccagctcgaacaagccaagtcagccctggcccaggca
cgcaccgccctggaacaacagcaccagcaaaccagccgtcgccgccagaccctggaggac
agcgagcaggcgctcgagcaggcccggcccgccatcgcccaggcccgtgaaattgccagc
gaactcaagggccgcgagcaacagcatcgacagctggaggacgaacaccagaagcgcaag
cgccagcgcgaggatctcgacgggcagcagcgagccctggcagagcgccatcgccgccat
ctggagcagcgcgacgccgccacccgcaccctgtcacgccatcttggccagcatcagcag
gtcgcaacggccagggccgaggcccagcagcacctcgaggacgccggccatcgtctgctg
gcgctgtccgaactggagcagcgctggcgtctactgcaccagctcgatgagcagcagcgc
cggctcgacgccgagcgccgccgcgacagcgcacagcgcgacgaactgctggaccaaggc
aagcaggcgcgggcgcgcctggaccacgcctcggcggagcatgagcagctcacgcgcttt
atccagcgcgcccgcgccacccgaagcgacagcgtcgccgacatgcgcgccaccctggaa
ccggacaccgcctgtccggtgtgtggcagtcacgagcacccctggcgcgactcgcccccc
gccaccccggaggccacccagctcgccgcccagatcgcactggaggatgaacagctcgcc
gtgtccgaaagccgactcggcgagctgcgcgagcagcgtgacgccctgttcgggcgcttt
caggcgctgaaggccagcgtcgaacaggcggaagcgagcctcctcgcgcttgaacctcga
aggaacgaggctcaggccggtctcgaagaagcccaagccaggctcgacgacccggcgctc
gccgagcagtggcgcgccctcgacgctgaggcccgccaagcctggctcaccgagcacagc
gacaaggcccgccagcgccagcaacaggctcgcgagcgcctccaggcactggacgacgcc
gagcgccaactggccccgctggcagaggccatcgaagacgacgagcgagagcgtcaggcg
cttgccttgcgcgctgccaacttcgacgaggaactcaagcggctcgacgatcagcgtccc
gaactgacccgcagcatcgacgagcacagacgacgtctggccgaggcgctcggcgatgac
cgctcggcggatgcctggctcgagcgtctcgaagcccaggtccgccaggcacgtcaggac
catgagcaggcccgccaggcccatgaccaggcccagcgtcaggtgctgagcctgacccag
aggatcgagcacgagggcaaggcgctctcggtgctggaggacgaaaagacccgcctggac
gcggagctggaacgctggcgcagcgagcacccggacatcaccgatggcgacctggagcgg
ctgctcgaccaggccgatgatgcgctcaaggccctgcgcgcccgactggacggcgcccgc
gaggcctgccagaccgcccgcaccagtcgcgacgagcgtcgccagggctggcgcgcctgg
cgggcccgccacctgccggagcaggacccgcagacactgctcgacgaggccacccaacgc
cagctggatgcacgccaggccgacctcgacgccagacgtgaggccaaccggccgcggctg
gaggccgcccagcaacgccgcgatggcgccctgcacgccgtgcgcgacgatgatcgacgc
cggcagcgccaacgtgacggcctcgaggccctggaaagggccagggccgagcatcatcgc
tggggccgcatcgccgagctgatcggcgccgccgacggcaagaccttccggcgcatcgcc
caggcctggaacctggagcgcctgatcgacgaggcaaacgtccacctggcgggcctcagc
cggcgctaccgtctggtgagaggaggcagcccgctggggctcctggtgatcgatcaggac
gtcgccgacgagcgtcgctcggtgcactcgctatccggcggcgagacctttctggtgtcg
ctggccatggcgctcgggctcgcctcgctggcctcgggggagctggccatcgagtcgctg
ttcatcgacgaaggcttcggcagcctcgacccccagtcgctggcgctggccatggacgcc
ctcgacggtctccaggcccagggccgacgggtcggggtcatctcccacgtccaggagatg
catgagcgcattccggtgcagatccaggtgcatcccgccggcaatggcgagagtcgggtc
gcgctgtccgactga
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