Halomonas sp. DN3: NKF27_07440
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Entry
NKF27_07440 CDS
T10930
Name
(GenBank) AMP-binding protein
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
hadn Halomonas sp. DN3
Pathway
hadn00061
Fatty acid biosynthesis
hadn00071
Fatty acid degradation
hadn01100
Metabolic pathways
hadn01212
Fatty acid metabolism
hadn02024
Quorum sensing
hadn04146
Peroxisome
Module
hadn_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
hadn00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
NKF27_07440
00071 Fatty acid degradation
NKF27_07440
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
NKF27_07440
09145 Cellular community - prokaryotes
02024 Quorum sensing
NKF27_07440
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
hadn01004
]
NKF27_07440
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
hadn04147
]
NKF27_07440
Enzymes [BR:
hadn01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
NKF27_07440
Lipid biosynthesis proteins [BR:
hadn01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
NKF27_07440
Exosome [BR:
hadn04147
]
Exosomal proteins
Exosomal proteins of breast milk
NKF27_07440
Exosomal proteins of breast cancer cells
NKF27_07440
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
AbiTii
AMP-binding_C_2
Motif
Other DBs
NCBI-ProteinID:
USZ51319
LinkDB
All DBs
Position
1680953..1682641
Genome browser
AA seq
562 aa
AA seq
DB search
MSENAAASIVRGEALEGLDDYHSVMDIFHRSVKRYDEKVAFSCMGKSLTYAELDRLSGDF
AAWLQHETNLEPGDRVAIQLPNLLQFPVAVFGAIRAGMVVVNTNPLYTEREMTHQFKDSG
AKAILILANMADKLERVLDKTDIEHVVITEIGDLHDFPKRPLINFVVKYVKKMVPRYSIP
KAVRLRQVLKQGASLEHREVERELDDIAALQYTGGTTGLAKGTMLTHRNLVANMLQAKQI
IGGGLSEGSEVVVAPLPVYHIYTFTVNCLFMLEGGNHSLLITNPRDLDTFIKELSKTRFT
GFVGLNTLFNALCNRDDFKALDFSHLHLTISGGMALTKAAAKRWEEVTGCPIAEGYGLTE
TSPIVSFNPVEAIQLGTIGRPVAGTELKLCNPDGGDPEPGEPGELCVRGPQVMKGYWNRD
DETAKVIDADGFFHTGDIAVIQDDGYVRIVDRKKDMILVSGFNVYPNEIEDVVAAHPKVV
ESCAVGVPDETSGEVIKLFVVAKDSSLTSDELRAWCKQELAGYKVPKLVEFRDELPKTNV
GKVLRRQLRDEGSTETGTGTDG
NT seq
1689 nt
NT seq
+upstream
nt +downstream
nt
atgagtgagaacgccgctgcatcgatcgttcggggggaggccctggaagggctcgatgac
tatcattcggtgatggatatcttccaccgctccgtcaagcgctacgacgaaaaggtggcc
ttctcgtgcatgggcaagtccctgacctacgccgagcttgaccggctgtccggtgatttc
gccgcctggctgcagcacgagaccaaccttgagcccggtgatcgggtggcgatccagttg
ccgaacctgctgcagttcccggtggcggtgttcggcgccattcgcgccggcatggtggtg
gtcaacaccaatccgctgtacaccgagcgcgagatgacccaccagttcaaggattccggc
gccaaggcgatcctgatcctggccaacatggcagacaagctcgagcgggtgctggacaag
accgacatcgagcatgtggtgatcaccgagatcggtgatctgcacgacttccccaaacga
ccgctgatcaactttgtggtcaagtacgtcaagaagatggtgccgcgctactcgatcccc
aaggcggtcaggttgcgtcaggtgctcaagcaaggcgcctccctcgagcaccgtgaggta
gaacgcgagctcgacgatatcgccgcgctgcagtacaccggggggaccaccgggcttgcc
aagggcaccatgctgacccaccgcaatctggtggccaacatgctgcaggccaagcagatc
atcgggggtggcttgagcgagggtagtgaggtggtggtcgcgccgctgccggtctatcac
atctatacctttacggtgaactgcctgttcatgctggaaggcggcaaccattcgctgctg
atcaccaatccgcgggacctcgatacctttatcaaggagctctcgaagacgcgtttcacc
ggcttcgtcgggctcaatacgctgttcaatgcgctatgcaatcgtgacgatttcaaggcg
ctggacttctcccacctgcacctgaccatctccggcggcatggcgctgaccaaggccgcg
gccaagcgttgggaagaggtgacgggctgccccatcgccgagggttacggcctgaccgag
acctcgccgatcgtcagcttcaacccggtggaggcgatccagctgggcaccatcggccgc
cccgtcgccggcaccgagctcaagctgtgcaaccctgacggtggcgaccccgagccgggc
gagccgggcgagctgtgcgtgcgcggcccccaggtgatgaagggatactggaaccgcgat
gacgagacggccaaggtcatcgatgccgatggcttcttccacaccggtgacatcgcggtc
atccaggacgatggctacgtgcgtattgtcgatcgcaagaaggacatgattctggtgtcc
ggcttcaacgtctatcccaatgagatcgaggacgtggtcgcggcccatcccaaggtggtc
gagtcctgcgccgtcggggtgcccgacgagaccagcggcgaagtcatcaagctgttcgtg
gtggccaaggacagctccttgaccagtgacgagctgcgcgcctggtgcaagcaggagttg
gccggctacaaggtgcccaagctggtggagtttcgtgacgaactgcccaagaccaacgtc
ggcaaggtgctccggcgccagttgcgtgacgaaggcagcaccgaaaccgggaccggcacc
gacggctga
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