Halomonas sp. DN3: NKF27_07920
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Entry
NKF27_07920 CDS
T10930
Symbol
msbA
Name
(GenBank) lipid A export permease/ATP-binding protein MsbA
KO
K11085
ATP-binding cassette, subfamily B, bacterial MsbA [EC:
7.5.2.6
]
Organism
hadn Halomonas sp. DN3
Pathway
hadn02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
hadn00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
NKF27_07920 (msbA)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
hadn02000
]
NKF27_07920 (msbA)
Enzymes [BR:
hadn01000
]
7. Translocases
7.5 Catalysing the translocation of carbohydrates and their derivatives
7.5.2 Linked to the hydrolysis of a nucleoside triphosphate
7.5.2.6 ABC-type lipid A-core oligosaccharide transporter
NKF27_07920 (msbA)
Transporters [BR:
hadn02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
NKF27_07920 (msbA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_16
AAA_29
DEAD
AAA_22
nSTAND1
AAA_25
DUF87
AAA_30
RsgA_GTPase
MMR_HSR1
AAA_21
nSTAND3
AAA_23
Motif
Other DBs
NCBI-ProteinID:
USZ51963
LinkDB
All DBs
Position
1781845..1783581
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AA seq
578 aa
AA seq
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MEYSGWTLYKRLLGYVKPFWKSFLVAVVGYAIYAASSTALAEMMKRLIDGIQNPDAAFRL
FLPLFVVGMFGARGVGTFLGTYFMSNVARNMVHALRCDVFNHMLRLPGRFFDNHSSGHLI
SRVTYHVEQVTGAGTKAITVILQEGLFVLGLLGYLLWTNWMLTLLFMAVTPLIGGVVSYA
SKRFRRISKRIQRSMGDVTHVASEALTGYRVVRTHGAEKYEMGRFRDASEVNRRQSMKEA
LTKATSTPVIQLLVALSLALLVWLAMSPALMDNMTPGEFVAFITAASLMAKPIRSLSEIN
GTIQKGIAASSELFGLLDEPEERDTGTLMPERLQGRIQLEQVRFAYGDDQPEVLKGIDLD
VRKGEMVAIVGRSGSGKSTLVSLLPRFYRPTGGRILIDGTPIEEYQLTALRQQIALVSQQ
VTLFNATIAENIAYGVPDADPADIEAAARAAHAHEFIERMPGGYQALVGDNGVMLSGGQR
QRMAIARAIFKDAPILILDEATSALDTESERHIQAALEEVCKDRTTLVIAHRLSTIERAD
RILVMEQGEIIEQGSHAELLERDGGAYAALHQLQFQEA
NT seq
1737 nt
NT seq
+upstream
nt +downstream
nt
atcgaatactccggctggacgctctacaagcgtcttcttggttacgtcaaacccttctgg
aagtcctttctcgtcgccgtggtcggttacgccatctacgcggcgtccagtaccgccctg
gccgagatgatgaagcgcctgatcgatggcatccagaatcccgacgccgcctttcgtctg
tttctgccgctgttcgtcgtcggcatgttcggcgccaggggcgtcggcacctttctcggc
acctacttcatgagcaacgtcgcacgcaacatggtgcacgcgctgcgctgtgacgtcttc
aaccatatgctgcgcctgccggggcgcttcttcgacaatcattcttccggccacctgatc
tcgcgggtgacctaccatgtggagcaggtgaccggcgcaggcaccaaggcgatcacggtt
atcctccaggagggcctgtttgtactcggcctgctgggctatctgctgtggaccaactgg
atgctgacgctcttgttcatggccgtgacgccgctgattggtggcgtggtgagctacgcc
agcaagcgctttcggcgcatttccaagcgcatccagcgctccatgggggacgttacccac
gttgcctccgaggccttgaccggctaccgcgtggtgcgtacccacggcgccgagaaatac
gagatggggcgcttccgcgacgccagtgaagtcaaccgtcgccagagcatgaaggaggcc
ctgaccaaggccaccagcactccggtcatccagttgctggtggcactgtcgctggcgctg
ctggtgtggcttgccatgtcaccggcgctgatggacaacatgacgccgggcgaattcgtg
gccttcatcaccgccgcctcgctgatggccaagccgattcgctcgctcagcgagatcaac
ggcaccatccagaagggtatcgctgcctccagtgaactgttcgggctgctcgacgagcct
gaggaacgcgacaccggaaccctgatgcccgagcgcctgcaggggcggatacagctcgaa
caggtgcgcttcgcctacggagacgatcagcccgaggtgctcaagggcatcgacctggac
gtgcgcaagggcgagatggtggccatcgtcggccgctcgggcagcggcaagtcgaccctg
gtcagcctgttgccgcgcttctaccgaccgacgggcgggcgtatcctgatcgatggcacc
cccatcgaggagtaccagctgacggcgctacgacagcagattgcgctggtgtcccagcag
gtcaccctgttcaacgccaccatcgccgagaacatcgcctacggggtccccgatgccgat
cctgcagacatcgaggcggcggcccgcgccgcccacgcccacgagtttatcgagcgcatg
cccggcggctaccaggcgctggtcggagacaacggcgtgatgctctccggtggtcagcgt
cagcgcatggcgatcgctcgggcgatcttcaaggatgctcccatcctgatcctagacgag
gcgacctcggcgctggacaccgagtccgagcgccatatccaggcggccctggaagaggtc
tgcaaggaccgcaccaccctggtcatcgcccaccgcctgtcgaccatcgaacgggccgac
cgcatcctggtcatggagcagggcgagatcatcgagcagggctcccacgccgagctgctg
gaacgcgacggcggtgcctacgccgcgttgcaccagctgcaattccaggaggcgtag
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