Halomonas sp. DN3: NKF27_08045
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Entry
NKF27_08045 CDS
T10930
Name
(GenBank) ATP-dependent helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
hadn Halomonas sp. DN3
Pathway
hadn03420
Nucleotide excision repair
hadn03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
hadn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
NKF27_08045
03430 Mismatch repair
NKF27_08045
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hadn03400
]
NKF27_08045
Enzymes [BR:
hadn01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
NKF27_08045
DNA repair and recombination proteins [BR:
hadn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
NKF27_08045
MMR (mismatch excision repair)
Other MMR factors
NKF27_08045
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
Viral_helicase1
UvrD_C_2
PcrA_UvrD_tudor
AAA_30
AAA_12
Motif
Other DBs
NCBI-ProteinID:
USZ51428
LinkDB
All DBs
Position
1807335..1809539
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AA seq
734 aa
AA seq
DB search
MASPALERLALTPEQRCVVAHPAGHARVAAVAGAGKTTTLVARVLHLLSHGVSARRMMVL
MFNRAAREDFQRRLVAMAEPGMELPEVRTFHSLGHRLSQSLTRWGALPRRELLTADWQQE
RLLRQATLEALAQVDEDRDAALEPDRIEELAHFCSLVKAEVIDPQLLYERLELGEGTRHF
VVAHQCLETLLADHGVMTYSDLLYRPLLALEGDPALRHRVQGFLDHVIIDEYQDINAAQQ
RLLAVLAGDQASVMAVGDANQCIYEWRGAHPEAMLENFTRIFGAATDYPLSTTFRHGHAL
ALAANHAIAGNPRRPDQLCLAAPTNPRTELKVARGASAFLDGLKRWVEAGRRLDEACLLV
RSWTLSVPMQLALLREGIPFRLAREDRFVFRLPLVEALAGYLSLALSPEQLRDPGALMPM
FAQPTCFVPREVLAGLVQRLADTQTWPGPGDALLARLKPHQKRTLKRRWQLLCELPKLAH
LSADALLEHVVAEVEAEKVLKRAASRRDKGEEDVRLLDVLIEQAREVGDIATFIELLRRP
VQNRDEGVLINTVHGAKGLEWPLVMVGAVNEEDFPHYSRDNPLSPERLEEERRLYYVAIT
RAIERLVILHDGGDHRPSRFIQESACRDASAVARALYRCADGADPEEVSVAEPALVGRYL
NALGQPLPIKALERAPGNGHYQVGERIRHGVFGDGEVALVEGDPANPVIEVRFDRAGKRR
LIAHRAPIERLSSA
NT seq
2205 nt
NT seq
+upstream
nt +downstream
nt
atggcttcacctgcattggagcggctcgcgctgacacccgaacaacgctgcgttgtcgcc
cacccggcaggccacgccagggtcgcggcggtggccggagcgggcaagaccaccaccctg
gtggccagggtactgcacctgctgtcccacggagtcagcgcccggcgcatgatggtgctg
atgttcaaccgcgccgcccgggaagactttcagcgccgtctggtggccatggccgaaccc
ggaatggaactgccggaggtgcgtacctttcactctctcggacatcgcctgagtcagagc
ctgacccgctggggcgcgctgccacggcgcgaactgctgaccgcagactggcagcaggag
cgactgctgcgccaggcgaccctggaggcgttggcccaggtcgacgaggatcgcgacgcc
gcgctcgagcccgatcgcatcgaggaactcgcccacttctgttcgctggtcaaggccgag
gtgatcgacccccagttgctgtatgagcggctcgagctcggcgaggggactcgccacttc
gtcgtcgcccaccagtgtctcgagaccttgctggccgatcacggcgtgatgacctattcg
gatctgctgtatcgaccgctgctggcactcgaaggtgatcccgcgctgcgccatcgggtt
cagggcttcctcgaccatgtgatcatcgacgagtatcaggacatcaatgccgcccagcag
cggttgttggcggtgctggccggcgaccaggcttcggtgatggcggtgggtgacgccaac
cagtgtatctacgaatggcgcggcgcccacccggaggccatgctcgagaactttacccgg
atcttcggtgccgccaccgactaccccttgtccaccacctttcgccatggtcacgccttg
gcgctggccgccaatcatgccatcgccggcaacccgcgtcgcccggaccagctatgcctg
gcggcgcccaccaatccgcgcaccgagctcaaggtggcacggggcgccagtgccttcctc
gatggactcaagcgctgggtggaagccggccgtcgtctcgacgaagcctgtctgctggta
cgtagctggaccctgtcggtgccgatgcagctggcgctgttgcgcgagggcattcccttt
cgcctggcccgggaggatcgcttcgtctttcgcctgccgctggtggaggctctggccggc
tatctatcgctggcgctgtcgcccgagcagctgcgcgaccctggcgcgctgatgccgatg
tttgcccagccgacctgcttcgtaccacgtgaagtgcttgctggcctggttcagcgcctg
gccgacacccagacctggccggggccgggcgacgcgctgctggcgcgactgaagccgcac
cagaagcgcaccctcaagcgtcgctggcaactgctgtgcgagctgccgaagcttgcccat
ctgtccgccgacgcgctgctcgagcatgtggtcgcggaggtcgaggcggaaaaggtgctc
aagcgcgccgcctcccgccgcgacaagggcgaggaggacgtgcgcctgctcgatgtcctg
atcgagcaggctcgggaggtcggcgacatcgccacctttatcgagctgctgcggcgcccg
gtccagaaccgcgacgaaggggtgttgatcaatacggttcatggcgccaagggcctggag
tggccgctggtgatggtgggggcggtcaatgaagaggactttccccactacagtcgtgac
aaccccctgtcccccgagcgtctcgaggaagagcgcaggctctactatgtggccatcacc
cgggccatcgaacgcctggtcatcctccacgatggcggcgatcatcgtcccagccgcttt
atccaggagagcgcctgccgcgacgccagcgccgtggccagggcgctgtaccgatgcgct
gacggagccgaccccgaggaggtgagcgtcgccgagccagcactggtggggcgctatctg
aatgccctggggcagccgctgccgatcaaggcgcttgagcgagcgccaggcaatggccac
taccaggtgggtgagcgcattcgccacggcgtcttcggtgacggtgaggtcgccttggtg
gaaggcgaccccgccaatccggtcatcgaggtgcgcttcgatcgtgccggcaagcgccgc
ctgatcgcccatcgcgccccgatcgagcggctgtcgagcgcctga
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