Halomonas sp. DN3: NKF27_08765
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Entry
NKF27_08765 CDS
T10930
Symbol
kdsB
Name
(GenBank) 3-deoxy-manno-octulosonate cytidylyltransferase
KO
K00979
3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:
2.7.7.38
]
K03270
3-deoxy-D-manno-octulosonate 8-phosphate phosphatase (KDO 8-P phosphatase) [EC:
3.1.3.45
]
Organism
hadn Halomonas sp. DN3
Pathway
hadn00541
Biosynthesis of various nucleotide sugars
hadn01100
Metabolic pathways
hadn01250
Biosynthesis of nucleotide sugars
Module
hadn_M00063
CMP-KDO biosynthesis, ribulose-5P => CMP-KDO
Brite
KEGG Orthology (KO) [BR:
hadn00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
NKF27_08765 (kdsB)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
hadn01005
]
NKF27_08765 (kdsB)
Enzymes [BR:
hadn01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.38 3-deoxy-manno-octulosonate cytidylyltransferase
NKF27_08765 (kdsB)
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.45 3-deoxy-manno-octulosonate-8-phosphatase
NKF27_08765 (kdsB)
Lipopolysaccharide biosynthesis proteins [BR:
hadn01005
]
Lipid A
NKF27_08765 (kdsB)
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GFIT
Motif
Pfam:
CTP_transf_3
NTP_transf_3
Hydrolase_3
Hydrolase
HAD_PNKP
HAD_2
Motif
Other DBs
NCBI-ProteinID:
USZ51568
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Position
1983134..1984411
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AA seq
425 aa
AA seq
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MNVRIVIPARYGSSRLPGKPLADIGGKPMIQHVYERATTINGVAGVIIATDDERVLSAVE
GFGGQAIMTDPDHQSGTDRLVEVSRAFDADIFVNIQGDEPLFRPEDVEKLIDCMAADESV
DVATLYHNIDSVEARNPNSVKLVVNAKGDALYFSRSAIPYDRDGDGASFRKHIGIYSYRR
SVLDQYGELEQPMLEAAEKLEQLRLLHAGFKIRTVEVEEAAAGVDTPECLERVRALVSGV
TNSRPQQPTLADIKLVITDVDGVLTDGRLVYDTQGESLKTFHVHDGLAIRVLEMSDIKVA
VLSGRDSAVLRKRLSDLKIERVRLGAKDKRLACKELMEEANVACENTLFIGDDTLDLPAF
EACGLSVSVADAPDYIRESADMVLSSRGGDGAFRELADAILDAQGKLSNIATADGYEQLT
GFKAQ
NT seq
1278 nt
NT seq
+upstream
nt +downstream
nt
gtgaacgttcgcattgtgattcctgcccgttatggctccagcaggttgccagggaaaccg
ctagcggacattggtgggaagccaatgatccagcatgtttacgaacgagcaaccactatt
aatggtgttgccggtgtcattattgctacagacgatgagcgtgtgttgagtgccgtcgag
ggcttcggtggtcaggcaatcatgaccgatccagatcaccaatcggggactgaccgtctc
gtcgaagtgtctagagcctttgatgcagatatcttcgtcaatattcaaggcgatgagcct
ctatttcgtccagaagatgtcgaaaagttaatcgactgtatggctgctgacgaatcggta
gatgtggctaccttgtatcataatattgactcagtagaggcgcgaaacccgaattcggtg
aaactggtagtgaatgccaagggagatgctttatattttagccgttctgcaattccttat
gaccgagatggtgatggtgcgagctttaggaagcacatagggatatatagttatcgacgc
tcggtactagaccaatatggcgagttggaacaaccgatgctggaggcagcggaaaagctt
gagcaattgaggctactacacgcgggattcaagatacgtaccgtcgaagtcgaagaagca
gcggcgggcgtggatacccctgagtgcctagaacgtgttcgcgctctagtgtctggcgtc
acgaattcgcgcccacaacagccgacacttgcagatatcaaattggtaattaccgatgtg
gacggtgttttaactgacggacgtctcgtttatgatacccaaggcgagagtttaaaaacc
tttcatgtgcacgatgggttggcgatacgagtcttggaaatgtcagatatcaaagtggct
gtcttgtcaggaagagattcggccgtattgaggaaacgactttcagatctcaagatcgaa
agggtccggttgggtgcaaaagataagcgcttggcatgtaaagagttgatggaagaggca
aatgtggcctgtgaaaacactcttttcattggggatgacaccttggatttgccggctttt
gaagcctgtggcttatcggtgagcgtggccgatgctccagactatattcgggaatctgcg
gatatggttctatcgtcccgcgggggagacggagcgttcagggaacttgccgatgctatc
cttgatgctcaagggaagttatcgaatattgcgacggctgatggatatgaacaactgacg
ggtttcaaagcgcaatga
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