Halomonas sp. DN3: NKF27_09010
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Entry
NKF27_09010 CDS
T10930
Symbol
gyrA
Name
(GenBank) DNA gyrase subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
hadn Halomonas sp. DN3
Brite
KEGG Orthology (KO) [BR:
hadn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
hadn03032
]
NKF27_09010 (gyrA)
03400 DNA repair and recombination proteins [BR:
hadn03400
]
NKF27_09010 (gyrA)
Enzymes [BR:
hadn01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
NKF27_09010 (gyrA)
DNA replication proteins [BR:
hadn03032
]
Prokaryotic type
DNA Topoisomerases
NKF27_09010 (gyrA)
DNA repair and recombination proteins [BR:
hadn03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
NKF27_09010 (gyrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
Trans_reg_C
Motif
Other DBs
NCBI-ProteinID:
USZ51613
LinkDB
All DBs
Position
2059649..2062402
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AA seq
917 aa
AA seq
DB search
MGDIAREILPVNIEDELKQSYLDYAMSVIIGRALPDVRDGLKPVHRRVLFAMHELGNDWN
KPYKKSARVVGDVIGKYHPHGDSAVYDTIVRMAQDFSMRHVLVDGQGNFGSIDGDNAAAM
RYTEVRMARLAHELLADLEKDTVDWVDNYDGTERIPDVLPTKVPNLLVNGSSGIAVGMAT
NIPPHNMNEIINACLALVDDYTLSVDDLMEHVPGPDFPTGGIINGRAGILEAYRTGRGRI
YIRAKHTIEHDDKSGRDHIIVTELPYQVNKARLIEKIAELVKDKKIEGIAELRDESDKDG
LRVVIEVKRGESGEVVVNNLFAQTQLQNVFGINMVALEDGEPKTMNLKQVLEAFIRHRRE
VVTRRTLFELKKARERGHILEGLAVAISNIDEVIELIKASPNAAEAKEKLLAKSWQPGQV
TGMLERAGATSCKPEDLEEGFGLDQAGGEYRLSPAQAQAILELRLHRLTGLETEKLLDEY
LSILEKIAELMAILASADRLLEVIREELIAVRDQFADERRTDIQASHLDLSIEDLIAEED
MVVTVSRSGYAKTQPLSDYQAQRRGGRGKSATAMKDEDVIEHLLVASTHDTVLLFSNRGK
VYWLKVYEMPAASRGSRGKPLVNLLPLEEGESINAIMPVKDYDPDCYIFFATARGTVKRT
SLEQFSRPRSVGLIAIDLEEGDRLVGAAITSGSDHAMLLSSNGKAIRFEESQVRAMGRTA
RGVRGMRLLDGAEVISLIIPQSLEIDADAEGGERGEAGDVDASGDDGQIYILTGSENGYG
KRTRLEEFPLRGRGGQGVIAMQTSARNGAMVAAMQVCSSDEMMLITDRGTLVRTRVEEVS
ISSRNTQGVTLIRLGEAESLVKTVRIQELDGDDELDAEDEEGGEDTVENSADDAAEGGSA
EPGDDSADDDSSTDNND
NT seq
2754 nt
NT seq
+upstream
nt +downstream
nt
atgggtgacatcgccagagagattctgccagtcaatatcgaggacgagctgaagcagtcg
tacctcgattacgcgatgagcgtgatcatcggccgagcgctgccggacgtgcgcgatggc
ctgaagccggttcatcggcgtgtgctgtttgcgatgcacgagctgggtaacgactggaac
aagccatacaagaagtccgcccgtgtggtgggtgacgtgatcggtaagtaccacccccac
ggcgacagtgcggtgtacgacaccatcgtgcgtatggcccaggacttctcgatgcgccac
gtgctggtcgatggccagggcaacttcggctccatcgacggcgacaacgccgccgccatg
cgttacaccgaggtgcgcatggcgcgcctggcccacgagctgctggccgatctcgagaag
gatactgtcgactgggtcgacaactacgacggtaccgagcggatccccgacgtgctgccg
accaaggtgccgaacctgctggtcaacggctcctcgggcatcgccgtgggcatggcgacc
aatatcccgccccacaacatgaacgagatcatcaacgcctgcctggcgctagtcgacgac
tacaccctgagcgtcgatgatctgatggagcatgtgccggggcccgacttccccaccggc
ggtatcatcaacggccgcgcgggcattctcgaggcctatcgtaccggccgcgggcgcatc
tatatacgcgccaagcacaccatcgaacacgacgacaagtccggccgtgaccacatcatc
gtcaccgagctgccttaccaggtgaacaaggcgcggctgatcgagaagatcgccgagctg
gtcaaggacaagaagatcgagggaatcgccgagttgcgcgacgagtccgacaaggacggt
ctgcgggtggtgatcgaggtcaagcgcggcgagagtggcgaggtggtggtgaacaacctg
ttcgcccagacccagctgcagaatgtcttcggcatcaatatggtggcgctggaggacggc
gagccgaagaccatgaacctcaagcaggtgctcgaggccttcattcgccaccgtcgcgag
gtggtcacccggcgcaccctgttcgaactgaagaaggcgcgtgagcgcggccacatcctc
gaaggcttggcggtggcgatctccaacatcgacgaggtgatcgagctgatcaaggcctcg
ccgaatgctgccgaagccaaggaaaagctgttggccaagtcctggcagcccggccaggtc
accggcatgctggagcgcgccggcgccacctcgtgcaagcccgaagacctggaagaaggc
tttggtctggaccaggctggaggcgagtaccgtctgtcgccggcccaggcccaggccatc
ctcgagctgcgcctgcaccgcctgaccggcctcgagaccgagaagctgctcgacgagtat
ctgtcgatcctcgagaagatcgccgagctgatggccatcctggcctccgccgatcgcctg
ctcgaggtgattcgcgaagagctgatcgcggtgcgcgatcagttcgccgacgagcgtcgt
accgacattcaggcaagccacctggacctgtccatcgaggacctgatcgccgaggaagac
atggtggtcacggtgtcccgctcgggttacgccaagacccagccgttgtcggactatcag
gcccagcgtcgtggtggtcgtggcaagtcggccaccgcgatgaaggacgaggacgtcatc
gagcacctgctggtggcctcgacccacgacaccgttctgctgttctccaatcgcggcaag
gtctactggctcaaggtctacgagatgcctgcggccagtcgcgggtcccgcggcaagccg
ctggtcaacctgttgccgctggaagaaggcgagtcgatcaacgccatcatgccggtcaag
gactatgatccggactgctacatcttctttgccaccgcccggggcacggtcaagcgcacc
agcctcgagcagttctcgcgtccgcgcagcgttggcctgatcgccatcgacctggaggag
ggcgatcgcctggtgggcgccgcgattacttccggcagcgaccacgccatgctgctgtcg
tccaacggcaaggcgatccgcttcgaggagtcccaggtccgtgccatgggccgtaccgcg
cgcggtgtgcgcggcatgcgactgctcgatggcgccgaggtgatcagcctgatcatcccg
cagagcctagagatcgatgccgacgccgagggcggtgagcgtggcgaggccggtgatgtc
gacgccagcggtgacgacggccagatctatatcctcaccggcagcgaaaacggctacggc
aagcgtacccgtctcgaggagttcccgctgcgcggtcgtggcggccagggcgtgatcgcg
atgcagaccagcgcccgcaatggcgccatggtggcggcgatgcaggtctgttccagcgac
gagatgatgctgatcaccgatcgcggcaccctggtgcgcacccgggtcgaggaagtctcg
atcagttcgcgcaacacccagggcgtcaccctgatccgcctcggcgaagccgaatcgctg
gtcaagaccgtgcgtatccaggagcttgacggcgacgacgagctcgacgccgaagatgaa
gagggtggtgaggacactgtcgagaactcggcagatgacgccgccgagggcggcagcgcc
gaaccgggcgacgacagcgcggacgacgacagcagcaccgacaataacgactga
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