Halomonas sp. DN3: NKF27_09685
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Entry
NKF27_09685 CDS
T10930
Symbol
gcvP
Name
(GenBank) aminomethyl-transferring glycine dehydrogenase
KO
K00281
glycine cleavage system P protein (glycine dehydrogenase) [EC:
1.4.4.2
]
Organism
hadn Halomonas sp. DN3
Pathway
hadn00260
Glycine, serine and threonine metabolism
hadn00630
Glyoxylate and dicarboxylate metabolism
hadn00670
One carbon pool by folate
hadn00785
Lipoic acid metabolism
hadn01100
Metabolic pathways
hadn01110
Biosynthesis of secondary metabolites
hadn01200
Carbon metabolism
Module
hadn_M00621
Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:
hadn00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
NKF27_09685 (gcvP)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
NKF27_09685 (gcvP)
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
NKF27_09685 (gcvP)
00670 One carbon pool by folate
NKF27_09685 (gcvP)
Enzymes [BR:
hadn01000
]
1. Oxidoreductases
1.4 Acting on the CH-NH2 group of donors
1.4.4 With a disulfide as acceptor
1.4.4.2 glycine dehydrogenase (aminomethyl-transferring)
NKF27_09685 (gcvP)
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Motif
Pfam:
GDC-P
GcvP2_C
Beta_elim_lyase
Aminotran_5
Glyco_hydro_42M
Motif
Other DBs
NCBI-ProteinID:
USZ51735
LinkDB
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Position
complement(2245606..2248500)
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AA seq
964 aa
AA seq
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MAFDTRRLAELADHDAFLRRHNGPDGDDRAKMLSALGVEGVESLIDKTVPANIRLGRELD
LDPPKAEAEALDYLYRLARQNKVARSYIGQGYYDTHLPAVIQRNVLENPGWYTAYTPYQP
EISQGRLEGLLNFQQMVMDMTGMELANASLLDEATAAAEAMALCRRSNKKAKTNAFFVAD
DVFPQTLDVLKTRASWFGYEIVIAPADELASHDVFGALLQYPGNDGRVHDLAPLIAEAKK
RGVMTCVATDLMALVLLKEPGAMGADIVVGSSQRFGVPMGFGGPHAAFFATTDKLKRSIP
GRIIGVSKDARGNTALRMAMQTREQHIRREKATSNICTAQALLANIAGFYAVYHGAEGLR
TIAGRIHRLTTILATGLAQKGVSLANDSYFDTLRLTGVDRGKIHGRAMTHEINLRYFDNG
DVGVSLDETTTAHDLDALFDVLLGEEHGLGVRELDDGILESQASGIPAACRRESDFLEHP
TFQRYRSETEMLRYLKRLENKDLSLAHAMIPLGSCTMKLNATTEMMPITWPEFARIHPFA
PKDQVAGYRQMIDELAAFLVEITGYDHISMQPNSGAQGEYAGLLAIRRYQAAQGEGHRDV
CLIPSSAHGTNPASAAMCSMRVVVVECDEDGNIDLADLKAKAEQHSQALSAIMLTYPSTH
GVFEEGVREACDIVHANGGQVYIDGANMNAQVGVARPGDFGGDVSHLNLHKTFCIPHGGG
GPGMGPIGVKAHLAPHVANHSVTPIDGVEEDSGAVSAAAFGSASILPISWAYIKMMGARG
LREATELAILGANYIATRLEAHYPVLYKGQNGTVAHECIIDIRPLKAASGISEEDIAKRL
MDYGFHAPTMSFPVAGTLMIEPTESESLYELDRFCDAMIGIREEIARVESGEWSLEDNPL
VKAPHTMADLMDADWNRGYSREIGAFPSEAVKGAKYWPAVNRVDNVLGDRQLICSCPSID
EYRD
NT seq
2895 nt
NT seq
+upstream
nt +downstream
nt
atggctttcgatacacgtcgcctggccgaactggccgatcacgatgcctttctccgtcgt
cacaatggtcccgatggggacgacagggccaagatgctgtcggccctgggtgtcgaaggc
gtggagtccttgatcgacaagacggtgcccgccaacatccgcctgggccgtgagctcgat
ctggacccccccaaggccgaagccgaggcgctggactacctgtatcgtctggcccgccag
aacaaggttgcccgcagctacattggccagggctactacgacacccacctgccggcggtc
attcagcgcaacgtgctggaaaacccgggctggtacaccgcctacaccccctatcagccc
gagatctcccagggccgcctggaaggcctgttgaacttccagcagatggtgatggacatg
accgggatggaattggccaacgcctcgctgctggatgaagccaccgccgccgccgaggcc
atggcgctgtgccggcgctccaacaagaaggccaagaccaatgccttcttcgttgccgac
gatgtcttcccccagaccctggacgtactcaagactcgcgcctcctggttcggctacgag
atcgtcatcgccccggcggacgaactcgcaagccatgacgtcttcggcgcgctgctgcag
tacccgggcaatgacggacgcgtccacgacctggcaccgctgatcgccgaggccaagaag
cgcggcgtgatgacctgcgttgccaccgacctgatggccctggtcctgctcaaggagccc
ggcgccatgggcgccgatatcgtggtcggctcgagccagcgtttcggcgtgccgatgggc
ttcggtggcccccacgctgcctttttcgccaccaccgacaagctcaagcgctcgatcccc
ggccgcatcatcggggtgtccaaggacgcccgcggcaacaccgccctgcgcatggccatg
cagacccgcgagcagcatatccgtcgcgagaaggccacctccaacatctgcaccgcccag
gcgctgctggccaacatcgccggcttctacgcggtgtaccacggcgccgagggcctgcgc
accatcgccgggcgcatccatcggttgaccaccatcctggccaccggcctggcccagaaa
ggcgtcagcctggccaacgacagctacttcgacaccctgcgtctgaccggggtcgatcgc
ggcaagatccacggtcgagccatgacccacgagatcaacctgcgctacttcgacaacggt
gacgtgggtgtcagcctcgacgagaccaccaccgcccacgacctggacgcactgttcgac
gtgctgctgggcgaggagcacggccttggcgtgcgcgaactcgacgacggcatcctcgag
tcccaggccagcggcattcctgcggcttgccgacgcgagagcgacttccttgagcacccg
accttccagcgctatcgcagcgagaccgagatgctgcgctacctcaagcgcctggagaac
aaggacctgtcgctggcccatgcgatgattccgctgggctcctgcaccatgaagctcaac
gccaccaccgagatgatgccgatcacctggccggagttcgcccgcatccatcccttcgca
ccgaaggatcaggtcgccggctatcgccagatgatagacgaactggcggccttcctggtg
gagatcaccggctacgaccacatctcgatgcagcccaactccggcgcccagggagaatac
gccggtctgctggcgatccgtcgctaccaggcggcccagggcgagggccaccgtgacgtc
tgcctgattcccagctccgcccacggtaccaacccggcctctgctgccatgtgcagcatg
cgcgtggtggtggtggagtgcgacgaggatggcaacatcgacctggccgacctcaaggcc
aaggccgagcagcactcacaggcgctgtccgcgatcatgctcacctacccgtccacccac
ggggtgttcgaggaaggcgtgcgcgaggcctgcgacatcgtccacgccaacggtggccag
gtgtacatcgacggcgccaacatgaatgcgcaggtcggcgtggcacgtccgggtgacttc
ggcggcgacgtcagccacctcaacctgcacaagaccttctgtatcccccacggcggtggt
ggccccggcatgggcccgatcggtgtcaaggcgcacctggccccccatgtggccaaccac
agtgtgaccccgatcgacggtgtcgaagaggactccggcgcggtgtccgcggcggccttc
ggctcggcctcgatcctgccgatctcctgggcctacatcaagatgatgggcgcacgcggc
ctgcgcgaggctaccgagcttgccatcctcggcgccaactacattgccactcgcctggaa
gcgcactatccggtgctctacaagggccagaacggcaccgtggcccacgagtgcatcatc
gacatccgtccgctcaaggcggcctccggcatcagcgaggaagacatcgccaagcgcctg
atggactacggcttccacgcccccaccatgtccttcccggtggccggcaccctgatgatc
gagcccaccgagtcggagtcgctctatgagctggaccgcttctgtgacgccatgatcggc
atccgcgaggagatcgcccgggtcgagagcggcgagtggagcctggaggacaaccctctg
gtgaaggccccgcacaccatggccgacctgatggacgcggactggaaccggggctactcc
cgcgagatcggcgccttcccctccgaggcggtcaagggcgccaagtactggccggcggtc
aaccgggtcgacaacgtgctgggcgatcgtcagctgatctgctcctgcccgagcatcgac
gaataccgcgactga
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