Halomonas sp. DN3: NKF27_09945
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Entry
NKF27_09945 CDS
T10930
Symbol
ruvB
Name
(GenBank) Holliday junction branch migration DNA helicase RuvB
KO
K03551
holliday junction DNA helicase RuvB [EC:
5.6.2.4
]
Organism
hadn Halomonas sp. DN3
Pathway
hadn03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
hadn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
NKF27_09945 (ruvB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hadn03400
]
NKF27_09945 (ruvB)
Enzymes [BR:
hadn01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
NKF27_09945 (ruvB)
DNA repair and recombination proteins [BR:
hadn03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
NKF27_09945 (ruvB)
RecFOR pathway proteins
NKF27_09945 (ruvB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RuvB_N
AAA_lid_4
RuvB_C
AAA
AAA_5
AAA_16
AAA_22
Mg_chelatase
TIP49
AAA_14
AAA_17
nSTAND3
RNA_helicase
ABC_tran
AAA_28
AAA_18
NB-ARC
Rad17
AAA_24
Motif
Other DBs
NCBI-ProteinID:
USZ51784
LinkDB
All DBs
Position
2319219..2320247
Genome browser
AA seq
342 aa
AA seq
DB search
MIDTDRLIAADPQEGEGRVDHAIRPRRLADYIGQPRVREQLEIFIHAARARDESLDHTLV
FGPPGLGKTTLANIIATEMGVGLTSTSGPVLERAGDLAAMLTNLKAGDVLFIDEIHRLSP
VVEEILYPAMEDFQLDIVIGEGPAARSIKLDLPPFTLVGATTRAGRLTSPLRDRFGIVQR
LEFYAIDELTEIVARSARLLEVHTDTDGAREVARRSRGTPRIANRLLRRVRDFAEVKAAG
HITAEVADQALNMLHVDHHGLDHMDRRLLLAMLEKFDGGPVGVDSLSAAIGEERDTIEDV
IEPYLIQQGLMMRTARGRVVTRQAWTHFGMAPDDQAFDASND
NT seq
1029 nt
NT seq
+upstream
nt +downstream
nt
atgatcgataccgaccgactgatcgccgccgatccgcaggaaggagaagggcgggtggac
cacgccatccgccccaggcgcctggccgactatatcggccagccccgggtcagggagcag
ctcgagatcttcatccacgccgcccgggcccgggacgagagtctcgaccacaccctggta
ttcggcccgcctggactcggcaagaccaccctggccaatatcatcgccaccgagatgggc
gtgggcctgacctcgacctccgggccggtgctcgagcgtgccggcgacctggccgccatg
cttaccaatctcaaggccggtgacgtcctgttcattgacgagatccatcgactttcgccg
gtggtggaagagatcctctatcccgccatggaagacttccagctggatatcgttatcggt
gagggcccggccgcacgctcgatcaagctcgatctgccccccttcaccctggtcggagcg
accacccgagccggccgtctgacgtcaccgctgcgcgaccgtttcggtatcgtgcagcgc
ctcgagttctatgccatcgacgagctgaccgagatcgtggcacgctcggcgcgcctgctc
gaggtacacaccgacacggacggcgcccgtgaggtggcccggcgctcccgtggcacgcca
cgtatcgccaaccggctgctgcggcgggttcgtgactttgccgaggtcaaggcggcaggg
cacatcaccgccgaggtggccgatcaggcgctgaacatgctgcacgtcgaccaccatggc
ctcgaccatatggaccgtcgcctgctgctggcgatgctcgagaagttcgacggtggcccg
gtgggcgtggattcgctgtcggcggccatcggcgaggagcgcgacaccatagaggacgtg
atcgaaccctacctgattcagcaaggtctgatgatgcgcaccgcacgaggccgggtggtg
acgcgccaggcctggacccatttcggcatggcccctgacgatcaggccttcgacgcttcc
aacgactga
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