Halomonas sp. DN3: NKF27_10465
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Entry
NKF27_10465 CDS
T10930
Symbol
dnaQ
Name
(GenBank) DNA polymerase III subunit epsilon
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
hadn Halomonas sp. DN3
Pathway
hadn03030
DNA replication
hadn03430
Mismatch repair
hadn03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
hadn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
NKF27_10465 (dnaQ)
03430 Mismatch repair
NKF27_10465 (dnaQ)
03440 Homologous recombination
NKF27_10465 (dnaQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
hadn03032
]
NKF27_10465 (dnaQ)
03400 DNA repair and recombination proteins [BR:
hadn03400
]
NKF27_10465 (dnaQ)
Enzymes [BR:
hadn01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
NKF27_10465 (dnaQ)
DNA replication proteins [BR:
hadn03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
NKF27_10465 (dnaQ)
DNA repair and recombination proteins [BR:
hadn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
NKF27_10465 (dnaQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
RNase_H_2
vATP-synt_AC39
Motif
Other DBs
NCBI-ProteinID:
USZ51880
LinkDB
All DBs
Position
complement(2426269..2427045)
Genome browser
AA seq
258 aa
AA seq
DB search
MRQIVLDTETTGIETRDGHRLIEIGAVEMINRRLTGNSYHQYINPEREIDAEAIGVHGIT
NERVANEPVFAEVAADFWEFIRGAELVIHNAPFDVGFIDHEFKLLKATHPELYAGPVKDH
CRILDTLTMARGLHPGQRNSLDALCKRYDIDNGHRVLHGALLDAEILADVYLAMTGGQTA
LTLDAGNDSDQQAAVPGELSVRRLSLEPGRLSVVRPTEQEMAAHLAKLDKVRGKAGECRW
DDLDPAYAGPGSATQDGA
NT seq
777 nt
NT seq
+upstream
nt +downstream
nt
atgcgacagattgtactggataccgagaccaccggtatcgagactcgcgacggccaccgt
ctcatcgagatcggcgccgtggagatgataaaccggcgtctgaccggaaattcctaccat
caatacatcaatcccgagcgtgagatcgatgccgaggcgatcggtgtccacggcatcacc
aacgagcgggtcgccaatgagccggtgttcgccgaggtggcggccgacttctgggagttt
atccgcggggccgaactggtcatccataacgcgcccttcgatgtcggcttcatcgaccac
gaattcaagctgttgaaggccacccaccccgagctatatgcagggcccgtcaaggatcac
tgtcgtatcctcgataccctgaccatggcaaggggactgcacccggggcagcgcaacagc
ctcgacgcgctttgcaagcgctacgacatcgacaatggtcaccgcgtgctgcacggggcc
ttgctcgatgccgagatcctggcagacgtctatctggcgatgaccggtgggcagaccgcc
ctgaccctggatgcgggcaacgacagcgaccagcaggcggcggtgcccggcgagctttcg
gtgcgtcggctgtcattggagccggggcggctgagcgtggtacgcccgacagagcaggag
atggcggcccatctggccaagctcgacaaggtgcgtggaaaggcaggtgagtgtcgctgg
gacgacctggaccctgcctacgccggccctggcagcgccacgcaggacggtgcctga
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