Halomonas sp. DN3: NKF27_10725
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Entry
NKF27_10725 CDS
T10930
Name
(GenBank) THUMP domain-containing protein
KO
K03151
tRNA uracil 4-sulfurtransferase [EC:
2.8.1.4
]
Organism
hadn Halomonas sp. DN3
Pathway
hadn00730
Thiamine metabolism
hadn01100
Metabolic pathways
hadn01240
Biosynthesis of cofactors
hadn04122
Sulfur relay system
Brite
KEGG Orthology (KO) [BR:
hadn00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00730 Thiamine metabolism
NKF27_10725
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04122 Sulfur relay system
NKF27_10725
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
hadn03016
]
NKF27_10725
Enzymes [BR:
hadn01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.1 Sulfurtransferases
2.8.1.4 tRNA uracil 4-sulfurtransferase
NKF27_10725
Transfer RNA biogenesis [BR:
hadn03016
]
Prokaryotic type
tRNA modification factors
Other tRNA modification factors
NKF27_10725
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
ThiI
THUMP
QueC
Rhodanese
tRNA_Me_trans
KIAA1549
Motif
Other DBs
NCBI-ProteinID:
USZ48007
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All DBs
Position
2494384..2495808
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AA seq
474 aa
AA seq
DB search
MGRCLATNLRNALRRQEPKTKVVAQWDHLVVRLPRGLAREDRLALEASMTRIPGVQRVAR
TRNRPLGDWRSTIEQLACERVSDIEGKRFKVKVKRKGHHDFGSVEVERALGAALLAHAAD
ARVDLSTPELVMPLRIDGDTLIEEVDLGPGLGGFPLGTQGEALVLMSGGYDSPVAAYRML
RRGIKCQFVLFRFGGQEQEKAVKALTRDLWQRYSASHKANFITVPFEEVVETLRREVPDA
LVSLVLKRLMIEAAARIAQRARIPALVTGEVIAQVSSQTLTNLGLIDRASHLPVLRPLLT
DDKQTIIDEAHRIATAEASSRMPEYCGGMSSRPRVKASLKELQAAEAGLPADLLDRALAS
ATRQPVDAPVSKGVSAPSQEPLAEVSFGGLHDFARTATRVIDVRPPDDVERRPLGPLACP
VDHIPFYELATRSDALDRDTRYLLYCDQGVMSRLQALHLKDRGLEHVGLLVASS
NT seq
1425 nt
NT seq
+upstream
nt +downstream
nt
atgggtcgctgccttgccaccaacctgcgcaatgcactcagacgccaggagcccaagacc
aaagtcgttgcccaatgggaccatctggtcgtaagacttccgcggggccttgcgcgcgag
gatcgtctggcactcgaagcgagcatgacccggataccgggcgttcagcgcgtggccagg
acgcgcaacaggccgcttggggactggcggagcaccatcgaacaactggcgtgcgaacgg
gtatcggatatcgaaggcaagcgcttcaaggtcaaggtcaagcgcaagggacatcacgac
ttcggttcggtggaggtggagcgtgcgctgggcgcagcgctgctcgcccatgctgctgat
gccagggtcgacctgagcacccccgagttagtgatgccactgcggatcgatggcgacacc
ttgatcgaggaagtcgaccttgggccgggcctcggtggctttccactaggcacccaggga
gaggcgctggtactgatgtccgggggttacgactctccggtggcggcctatcggatgctc
aggcgcggcatcaagtgtcagtttgtcctctttcgttttggcggacaggaacaggaaaag
gcggtcaaggcgctgacccgagacctgtggcagcgatacagtgcctcccataaggccaac
ttcatcaccgttcccttcgaggaagtggtcgagacactgcgtcgcgaggtacccgatgcc
ctggtgtcgctggtgctgaagcgcttgatgatcgaggccgccgcaagaatcgcgcaacgc
gcgcgcatccccgccctggtgacaggagaggtgatcgcccaggtgtccagtcagacactg
accaacctcggcctgatcgaccgcgccagccacctgccggtgttgcgaccgctgctgacc
gatgacaagcagaccatcatcgatgaggcccaccggatcgctaccgctgaggcgtcgagc
cgaatgcccgagtactgcggcgggatgtccagtcgccccagggtcaaggcgtcgctgaag
gagcttcaagcggcagaggccgggctaccggccgacctgctggatcgcgccctggccagc
gccactcgccagcctgtcgatgcgccagtatccaaaggcgtcagcgcaccctcccaggag
cccctggcagaagtctcctttggagggctccacgacttcgcccgaacggcgacccgggtc
atcgatgtgcggcccccggacgacgtcgagcgccgtccgcttgggccactcgcctgcccc
gtcgatcacattcccttctatgaactggcgacccgcagcgatgcgctggatcgcgacacc
cgctatctcctctattgtgaccagggcgtcatgagccgcctccaggcgctgcacctcaag
gaccgaggccttgagcatgtcggcctgctggtggcgtcctcctga
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