Halomonas sp. DN3: NKF27_12275
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Entry
NKF27_12275 CDS
T10930
Name
(GenBank) L,D-transpeptidase family protein
KO
K16291
L,D-transpeptidase ErfK/SrfK
Organism
hadn Halomonas sp. DN3
Brite
KEGG Orthology (KO) [BR:
hadn00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
hadn01002
]
NKF27_12275
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
hadn01011
]
NKF27_12275
Peptidases and inhibitors [BR:
hadn01002
]
Cysteine peptidases
Family C82
NKF27_12275
Peptidoglycan biosynthesis and degradation proteins [BR:
hadn01011
]
Peptidoglycan biosynthesis and degradation
Transpeptidase
NKF27_12275
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
YkuD
Motif
Other DBs
NCBI-ProteinID:
USZ48294
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Position
2837632..2838687
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AA seq
351 aa
AA seq
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MTSTSLRRPLVRLATLCGVVGALAAPLAAADDLPRGHYLLPEEGDLIGEVYTVEADEEDT
LIDIGHEHGIGFNAITRANPDISIWYPGEGTEVTIPAQFILPDAPRNGIVVNVAEMRLYY
YPPAKEGEPRTVQTYPIAVGRMDWKTPLGSTTITQMVKNPSWYPPASIRREHAEAGDPLP
GVVPPGPDNPMGTRKMRLGIPGYLIHGTNKPEGVGMRVTHGCIRMLPDDVENLFDQVAVG
TRVRLVNEPLKLGWSDEHLYVQAYPYLDEEEGAPIEDMTAAIEEVEAAVKDKDYDVDFAR
LRSAMETPSGLPVAMQTTTPAEPKPLPGSLYDHIELIADEPALLGQVSHEG
NT seq
1056 nt
NT seq
+upstream
nt +downstream
nt
atgacttcgacttcacttcgccggccactcgtccgcctcgccaccctgtgtggcgtcgtg
ggcgcgctggcggcacctctggcggcggccgacgacctgccccgaggccactacctgctg
cccgaagaaggcgacctgatcggtgaggtctacaccgtcgaagccgacgaggaagacacc
ctcatcgatatcggacacgagcacggcatcggcttcaacgccatcacccgcgccaacccc
gacatcagcatctggtatcccggcgagggtaccgaagtgaccatcccggcccagttcatc
ctgcccgatgcaccgcgcaacggcatcgtggtcaacgtggccgagatgcgcctctactac
tacccgccggccaaggaaggcgagccgcgtacggtgcagacctacccgatcgccgtgggt
cgcatggactggaagacgccgctgggctccaccaccatcacccagatggtcaagaatccg
tcctggtatccccccgcctccattcgccgcgaacacgccgaggccggcgaccccttgccc
ggcgtggtgccgcccggacccgacaaccccatgggcacgcgcaagatgcgcctgggcatc
cccggctacctgatccacggcaccaacaagcccgagggcgtcggcatgcgcgtcacccac
ggctgcatccgcatgctgcccgacgatgtcgagaatctgttcgatcaagtcgcggtgggc
acccgtgtccgactggtcaacgaaccgctcaagctcggctggtccgacgagcacctctat
gtccaggcctacccctacctcgacgaggaagaaggcgcgccgatcgaggacatgaccgcc
gctatcgaggaggtcgaggccgccgtcaaggacaaggactacgacgtcgactttgcgcgc
ctgcgtagcgccatggagacgcccagcggcctgccggtcgccatgcagaccaccaccccg
gcagaacccaagccgctgcctggcagcctctatgaccatatcgagttgatcgccgacgag
cctgccctgctgggacaggtcagccacgaaggctga
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