Halomonas sp. DN3: NKF27_12410
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Entry
NKF27_12410 CDS
T10930
Name
(GenBank) O-antigen ligase family protein
KO
K02847
O-antigen ligase [EC:
2.4.99.26
]
Organism
hadn Halomonas sp. DN3
Pathway
hadn00540
Lipopolysaccharide biosynthesis
hadn01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
hadn00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
NKF27_12410
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
hadn01005
]
NKF27_12410
Enzymes [BR:
hadn01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.99 Transferring other glycosyl groups
2.4.99.26 O-antigen ligase
NKF27_12410
Lipopolysaccharide biosynthesis proteins [BR:
hadn01005
]
Core region
NKF27_12410
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Wzy_C
Motif
Other DBs
NCBI-ProteinID:
USZ48318
LinkDB
All DBs
Position
complement(2869485..2870759)
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AA seq
424 aa
AA seq
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MRTPPGVARHYRGWPAQSSSAIQGLALFVFLSSLLTLPWAYRLTGMLLVSLAAMAVLVRR
SLPRDAESLAWVAMLALFGCQLVLDAGRSGPPLARYSVPSLPWWPWLGLLLLLAWRAKPP
SLYWWWRGITLGAVLSGLKALYDRLIEDERRAGDLINAIPFGNLSLVLGVLSLVWWLDNV
SEGRRGLFLWWAALGAVMGLLGSLLSGTRGGWLTLPLVMLVLVLRHGRRARLYWSTLTPH
RRFAIRMTATLAIGVATLVALPRLWALAEDIVLLWRQGAVDTNAGLRWHLWGIAGEAFAA
RPLWGWGEDGLVAWLETLVAAGRLPEGMAGIGFQLHSDVLDTAARRGLAGVALLLLFYGI
PLASFVRRLDHGDGQCRVLALSGALIVVMYAGFGLTQTMFRDPHTFSAYLVMCTACFALL
RTRG
NT seq
1275 nt
NT seq
+upstream
nt +downstream
nt
atgcgcacgccgccgggtgtggcaaggcactatcgaggatggccggcgcagtcctcgtcg
gcgatccaggggctggcactgttcgtcttcctgtccagtctgctgacgctaccctgggcg
tatcggttaaccggaatgctgctggtgtcactggcggcgatggcggtgctggtgcggcgc
agccttccccgggacgccgagtcccttgcatgggtggcaatgctggcgcttttcggctgt
cagctggtgttggacgcggggcgtagcgggccgcccctggcgcgttatagcgtgccgtca
ctgccctggtggccctggcttgggctgcttttgttattggcatggcgtgccaagcctccc
tcgctttactggtggtggcgcgggattaccctgggggcggtgctatccgggctgaaggcg
ctgtatgaccgactgatcgaggatgagcgtcgggctggcgatctgatcaacgccattccc
ttcggcaatctcagcctggtgctcggggtgctcagcctggtgtggtggctcgacaacgtc
agtgaagggcggcgcggcctgttcctctggtgggcggcgctgggagcggtgatgggtctg
cttggctcgctgctgtccggcacccggggcggctggctgaccctgccgctggtgatgctg
gtgctggtcctgcgccacggccggcgggcgcgcctctactggtcgacgcttacaccccac
cggcgcttcgccatccggatgaccgccaccctggcgatcggcgtggcgaccctggtggca
ctgcctcggctgtgggcactggccgaggatatcgtcttgctatggcgccagggggccgtc
gacaccaacgcgggcttgcgctggcatctgtggggcatcgctggcgaggcgttcgcagcc
aggcccctctggggctggggagaggatggtctggtcgcctggctcgagacactggtcgcg
gcgggccggctgcccgagggcatggccggaatcgggttccagcttcacagtgacgtgctg
gacaccgccgctcgacgtggccttgcgggggtggcgctgctgctgctgttctatgggatt
ccgttggcgagctttgtgcgtcgcctcgatcatggcgatggccagtgtcgtgtgctcgcc
ctgtccggcgcgctgatcgtggtgatgtatgcggggttcggcctgacccagacgatgttt
cgtgacccccataccttcagcgcctatctggtgatgtgcaccgcctgctttgccctgctg
agaacgcgaggctga
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