Halomonas sp. DN3: NKF27_14335
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Entry
NKF27_14335 CDS
T10930
Name
(GenBank) collagen-like triple helix repeat-containing protein
Organism
hadn Halomonas sp. DN3
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen_mid
Motif
Other DBs
NCBI-ProteinID:
USZ48676
LinkDB
All DBs
Position
3299469..3301967
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AA seq
832 aa
AA seq
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MTLQRKLLVIALASAMATLTACSGDSSNSRTLASNSQDPITSGGDDGSGGDGSGGDGSGG
DGSGGDGSGGDGSGGDGGDGDGSGGDGSGGDGSGGDGSGGDGGDGDGGDGIARSSLEGVF
LATADTSDGVDTTLTDIGNGISQQSAVPQLASVTEPAGTIVSETGDAVGDISSGVRDGAG
SLSTNDNYLGTTAAGVTNGVGELGQAVSATGDTVAGLGELPVVMELDARTGLVTKLGTTV
NGLGGKVERAGDALSVNFEDSSEVLGATTTKLGVALRPVLLGTDGKVTRVGQALVLPAQA
GNLLLRTGGTLADLGQRIGERYSLLGGAGDSVTGSGNIVIATGELLGGGEGDNGSGGGLG
GLLDGDTSAPDDGRTDLERTVASAGQTGVGAGDAVTALGDGISQQSLGGRGEFVTDGLGN
VISNGGQAVSGLSNGLDNGLGNFSNNPNAVGTTLAGGGVAVSETGEVVSSLGATVGNLNQ
LPLVMQLDNRSGAITQLGSSVAALGGGVTQAGNVLTLNFNDDGSHLGGLTREVSAVLRPV
VIQTDSGVTQLSQALVVGPEVGSVLIQAGVAVDGLGGRLGQGNDLATGLGAAVSGVGGIA
ANTGRLLGGDEARLLSRLDGQGLSQLESAGLLGEGALLSDLGGSQQGGLGGGLEAGLGDQ
LGGDSNLIAGLNDTLGGDGGLTAGLGNSLGGDSGSGLVSGVSDTLTSTLGGGDNGGGLVS
GVSDSLTSSLGGSESGGGLVSGVSDSLTSSLGGSESGGGLVSGVSDSLTSSLGGDDSSGG
NSGGLVGGTLDTVGGVTDKLTGDLGGNQDSGDDASSDKGIVGGLVGGLLGKN
NT seq
2499 nt
NT seq
+upstream
nt +downstream
nt
atgactttgcaacgaaaactactcgttattgctctcgccagcgcgatggcgaccctgacc
gcctgctctggtgattccagcaactctcgcaccctggccagtaacagccaggacccgatt
accagcggtggcgacgatggctccggtggtgatggctccggtggtgacggctccggtggt
gatggctccggtggtgatggctccggtggtgacggctccggtggcgatggaggcgatggt
gatggctccggtggtgatggttccggtggtgacggctccggtggtgacggctccggcggc
gatggaggcgatggtgacggcggcgatggcattgcccgctcatcgctggaaggcgtattc
ctggcgaccgccgatacaagcgacggtgtcgacaccacgcttaccgatatcggtaacggc
atctcccagcaaagcgccgtccctcagctggccagcgtcaccgagcctgcaggtacgatc
gtctccgaaacgggcgatgcggtcggcgacatctcgagcggcgtacgcgatggtgccggc
agcctcagcaccaatgacaactatctgggcaccactgccgctggcgtgaccaacggtgtc
ggcgagcttggacaggcagtttcggcgacaggagacaccgttgccggcctgggcgaactg
cccgtggtgatggaactcgacgcccgaacaggcctggtgaccaagctcggtaccaccgtc
aatgggctcggcggcaaggtggagcgcgcaggcgacgcactcagcgtcaatttcgaggat
tccagcgaggtgctcggggccaccactaccaagcttggtgttgcccttcgtcctgtgctg
ctgggcaccgacggcaaggtcacacgcgtcggtcaagcgctggtgttgccggcccaggcc
ggcaacctgctgctacgcaccggtggcaccctggccgacctcggtcagcgcatcggtgaa
cgctactctctgcttggcggcgccggcgatagcgtgaccggcagcggtaatatcgtcatc
gcgaccggcgagctgctcggcggcggtgaaggcgacaatggctcaggcggcggcctcggc
ggactgctcgatggcgataccagtgcacctgacgacggccgcaccgacctggagcgcacc
gtcgccagcgcaggacagaccggcgtcggtgctggagacgcggtcaccgccctgggagat
ggcatctcgcagcaaagcctgggaggacgcggcgagtttgtcaccgacggactgggcaat
gtcatcagcaatggcggccaagccgtatccgggctcagcaacggactcgacaatggtctg
ggcaacttctcgaataaccccaacgctgtgggaaccaccttggccggcggcggtgtagcg
gtctccgaaaccggagaggtggtatccagcctcggcgccaccgtcggcaacctgaaccag
ctccccctggtcatgcagctcgacaaccgcagcggcgccatcacccagctcggcagcagc
gttgcggcccttggtggcggcgtgacccaggccggcaacgtgctgacactgaacttcaac
gacgacggctcgcaccttggtggcctgacccgcgaagtgtcggcggtattgcgccccgtt
gtcatccagacagatagcggtgttacccagctcagccaggccctggtggtcggccccgag
gtaggcagcgtgctgatccaggccggcgtagcggtagatggactgggtggtcgcctgggg
cagggcaatgacctcgccactggcctgggtgcggctgtcagcggtgtcggaggcatcgcc
gccaacaccggcagactgttgggcggtgatgaagctcgactgctttcgcgtctcgacggc
cagggactcagtcagctggaatcggccgggctactgggcgaaggggccctactctcggac
ctcggaggaagccagcaaggcggcctcgggggcggactcgaggcagggcttggcgaccag
cttggtggtgacagcaacctcatcgccggactcaacgatacgctgggcggcgacggtgga
ttgaccgccgggctcggcaactcgctcggtggtgacagtggcagcggcctggtctctgga
gtctccgataccctgaccagcaccctcggcggtggcgataacggcggcggcctggtgtcc
ggggtctccgacagcctgaccagcagccttggcggtagcgaaagtggcggcggcctggtg
tccggggtctccgatagcctgaccagcagcctgggcggtagcgaaagcggcggcggtctg
gtgtccggggtctccgacagcctgaccagcagcctcggcggtgacgatagcagcggtggc
aatagcggcggtctggtcggcggcaccctggacaccgtcggtggcgtgaccgacaagctc
accggagatctgggcggcaaccaggacagcggtgatgacgccagcagcgacaagggcatc
gtcggtggactggtaggaggccttctgggcaagaactaa
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