Halomonas sp. DN3: NKF27_14375
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Entry
NKF27_14375 CDS
T10930
Symbol
fadB
Name
(GenBank) fatty acid oxidation complex subunit alpha FadB
KO
K01825
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:
1.1.1.35
4.2.1.17
5.1.2.3
5.3.3.8
]
Organism
hadn Halomonas sp. DN3
Pathway
hadn00071
Fatty acid degradation
hadn00280
Valine, leucine and isoleucine degradation
hadn00310
Lysine degradation
hadn00362
Benzoate degradation
hadn00380
Tryptophan metabolism
hadn00410
beta-Alanine metabolism
hadn00640
Propanoate metabolism
hadn00650
Butanoate metabolism
hadn00907
Pinene, camphor and geraniol degradation
hadn00930
Caprolactam degradation
hadn01100
Metabolic pathways
hadn01110
Biosynthesis of secondary metabolites
hadn01120
Microbial metabolism in diverse environments
hadn01200
Carbon metabolism
hadn01212
Fatty acid metabolism
Module
hadn_M00087
beta-Oxidation
Brite
KEGG Orthology (KO) [BR:
hadn00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00640 Propanoate metabolism
NKF27_14375 (fadB)
00650 Butanoate metabolism
NKF27_14375 (fadB)
09103 Lipid metabolism
00071 Fatty acid degradation
NKF27_14375 (fadB)
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
NKF27_14375 (fadB)
00310 Lysine degradation
NKF27_14375 (fadB)
00380 Tryptophan metabolism
NKF27_14375 (fadB)
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
NKF27_14375 (fadB)
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
NKF27_14375 (fadB)
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
NKF27_14375 (fadB)
00930 Caprolactam degradation
NKF27_14375 (fadB)
Enzymes [BR:
hadn01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.35 3-hydroxyacyl-CoA dehydrogenase
NKF27_14375 (fadB)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.17 enoyl-CoA hydratase
NKF27_14375 (fadB)
5. Isomerases
5.1 Racemases and epimerases
5.1.2 Acting on hydroxy acids and derivatives
5.1.2.3 3-hydroxybutyryl-CoA epimerase
NKF27_14375 (fadB)
5.3 Intramolecular oxidoreductases
5.3.3 Transposing C=C bonds
5.3.3.8 Delta3-Delta2-enoyl-CoA isomerase
NKF27_14375 (fadB)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
3HCDH_N
ECH_1
3HCDH
ECH_2
NAD_binding_2
Motif
Other DBs
NCBI-ProteinID:
USZ48684
LinkDB
All DBs
Position
complement(3309707..3311866)
Genome browser
AA seq
719 aa
AA seq
DB search
MIYQGNAISVARNGDDIATLTFDLKDESVNKLSGAVIKELGEALDAVRGESGVKGLMLKS
AKDAFIVGADITEFHAMFGKDEAEIQGMLEQVHGIFNGLEDLPFPTVSAINGLALGGGCE
VVLSTDFRVMTPDAKIGLPETKLGIVPGWGGCVRLPRVIGADNAIEWIAGGTENRADACL
KVGAVDAVVPADDLEAAALDMLARANAGELDFKARREEKNSALNLNPVEQMMVFETSKGY
VAGKAGPHYPAPVEAIKVIQKGAGEGRARAQAIEAKAFCKMAKTDVCYNLVGLFLNDQVV
KKKGGKYASKAQPVRQAAVLGAGIMGGGIAYQSASKGTPILMKDIKEDAIELGLKEARKL
FGKQASRGKLSVEGVAEKLANIRPTLSYGDFDNVDLVVEAVVENPKVKGAVLSEVEQQVG
DNTILASNTSTISITRLAENLKRPENFCGMHFFNPVHRMPLVEVIRGEKTSDAAVAATVA
YAKAMGKTPIVVNDCPGFLVNRVLFPYFGGFSLLVEKGADYQRVDKVMEKFGWPMGPAYL
LDVVGMDTAVHANEVMAEGFPDRMARDAKTAIQVMFDNDRLGQKNAKGFYAYEEDRKGKP
RKVSDEAAIELVKQVVSENREFSDEEIIARMMVPLCMETVRCLEDDIVGTPAEADMALIY
GIGFPPFRGGALRYIDAMGVAEFVALADSLAEELGPLYAPTDGLREMANSGKTFYADAK
NT seq
2160 nt
NT seq
+upstream
nt +downstream
nt
atgatctatcaaggcaatgccatttcggtggctcgcaatggcgacgatatcgccactctg
accttcgacttgaaggatgaatcggtcaacaagctctctggcgcggtgatcaaggagctg
ggcgaagcgctggacgcggtacgcggcgagagcggcgtcaagggcctgatgctgaaaagt
gccaaggacgcctttatcgtcggtgccgacatcaccgagtttcacgccatgttcggcaag
gacgaggcggagatccagggcatgctcgagcaggtccacggcatcttcaatggcctcgag
gacctgcccttcccgacggtcagcgcgatcaacggcctggccctcggtggcggctgtgag
gtggtgctgtccaccgacttccgcgtgatgacgcctgacgccaagatcggactgcccgag
accaagctcggtatcgtccccggctggggcggctgcgtacgtctgcccagggtgatcggc
gccgacaacgctatcgagtggatcgccggcggcaccgagaaccgtgccgacgcctgcctc
aaggtcggcgccgtggatgcggtggtgcccgccgatgacctcgaggcagcggcgctcgac
atgctggcgcgagccaacgccggcgaactcgacttcaaggcccggcgcgaggaaaagaac
agcgcgctgaacctcaatccggtcgagcagatgatggtgttcgagacctccaagggatat
gtcgccggcaaggccgggccgcactatccggcgccggtggaagccatcaaggtgatccag
aagggcgccggtgaaggtcgtgcgcgggcacaggcgatcgaggccaaggccttctgcaag
atggccaagaccgacgtctgctacaacctggtcgggctgttcctcaacgaccaggtggtc
aagaagaagggcggcaagtacgccagcaaggcgcaaccggtgcgccaggcggcggtgctc
ggtgccggcatcatgggcggcggtatcgcctaccagagcgcctccaagggcaccccgatc
ctgatgaaggatatcaaggaagacgccatcgagctgggcctcaaggaggcgcgcaagctg
ttcggcaagcaggcctcccgcggcaagctgtccgtcgaaggcgtggccgagaagctcgcc
aacattcgtccgacgctgtcctacggtgatttcgacaatgtcgatctggtggtcgaggcg
gtggtcgagaaccccaaggtcaagggtgcggtgctcagcgaggtcgagcagcaggtaggc
gacaacaccatcctggcgtccaacacctcgaccatctcgatcacccggctggccgagaac
ctgaagcgtcccgagaacttctgcggcatgcacttcttcaacccggtgcaccgcatgccg
ctggtcgaggtcatccgtggcgagaagaccagtgacgctgccgtggccgccaccgtggcc
tacgccaaggccatgggcaagacgccgatcgtggtcaacgactgcccgggcttcctggtc
aatcgcgtgctgttcccctatttcggcggtttcagcctgctggtcgagaagggtgccgac
tatcagcgcgtcgacaaggtgatggagaagttcggctggccgatgggcccggcctatctg
ctcgacgtggtcggcatggataccgcggtgcacgccaacgaggtgatggccgaaggcttc
cccgaccgcatggcgcgtgacgccaagaccgccattcaggtgatgttcgacaacgatcgc
ctggggcagaagaacgccaagggcttctacgcctacgaagaggatcgcaagggcaagccc
aggaaggtcagcgacgaggccgccatcgagctggtcaagcaggtggtcagcgagaaccgc
gagttctccgacgaagagatcatcgcgcggatgatggtgccgctgtgcatggagaccgtg
cgctgtctcgaagatgacatcgtcggcaccccggccgaggccgacatggcgctgatctac
ggcattggcttccctcccttccgaggtggtgcactgcgctatatcgatgccatgggtgtg
gccgaattcgtcgccctggccgacagcctggccgaggagctcgggccgctttatgcgccc
accgatggcctgcgtgagatggccaacagtggcaagaccttctacgccgacgccaagtga
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