Halomonas sp. DN3: NKF27_16405
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Entry
NKF27_16405 CDS
T10930
Name
(GenBank) DEAD/DEAH box helicase
KO
K19789
DNA repair protein RadD
Organism
hadn Halomonas sp. DN3
Brite
KEGG Orthology (KO) [BR:
hadn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hadn03400
]
NKF27_16405
DNA repair and recombination proteins [BR:
hadn03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factor
NKF27_16405
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ResIII
Helicase_C
DEAD
SWI2_SNF2
AAA_16
DUF7577
AAA_22
AAA_30
SLFN-g3_helicase
zf-tcix
AAA
DZR
Motif
Other DBs
NCBI-ProteinID:
USZ49064
LinkDB
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Position
complement(3807826..3809667)
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AA seq
613 aa
AA seq
DB search
MPQTESRLPPSSPPASAGPELRPYQREAVKRVIGHFRQSDEPAVVVLPTGSGKSLVIAEL
ARLARGRVLVLAHVRELVEQNHAKYLAYGLEADIFSAGLGRKESARQVVFGSVQSVVRHL
DAVSDEQNAHGPFTLLVIDECHRVSLDADSSYRRVIDHLRSRNPSLKVLGLTATPYRLGQ
GFIYHRHHHGMVRGDADSFFGDCVFEQPLRLMVRQGYLASPLKVDAAVARYDFSQLSPGT
GGLYREEELNRVVAGHRATPGIIAEVIERARQREGVMLFAASVAHAEEILGYLPAQASAL
ITGDTDSDERTRLIEDFKAKRLKYLVNVSVLTTGFDAPHVDLIAILRPTESVGLYQQIVG
RGLRLSPGKRDCLILDYAGNPWDLYAPEVGSPRPDSDSEPVQVPCPLCGHANLFWGKRDG
ELVIEHFGRRCQGLVDAEGRALAAAEPGARQCDFRFRFKTCGDCGAENDIAARRCHGCQT
LLVDADDKLREALKLKDARVLRVSGMLLESTVNGRGLPRLKVTYHDEDGATLAEWFALET
PAQRRAFEAVFLRDHARAPGVPWSPTSPDQVCREQQRLRAPDFVVGRKVGRHWQVREKLF
DYRGRYRTADSAD
NT seq
1842 nt
NT seq
+upstream
nt +downstream
nt
atgccccagaccgagtcccggctcccgccatcgtcgcctcccgcctccgcagggccagag
ctgcggccctatcagcgtgaggcggtgaaacgcgtcatcgggcactttcgtcagtccgat
gagcccgcggtggtggtgttgcccaccggcagcggcaagtcactggtcatcgccgaactg
gcccgcctggcccgagggcgggtgctggtgctggcccacgtgcgtgagctggtcgagcag
aatcatgccaagtacctggcctacggcctcgaggcggacatcttcagcgccggactcggg
cgcaaggagagcgctcgccaggtggtgttcggctcggtgcagtcggtggttcgccacctg
gacgcggtaagcgacgagcagaacgcccatggccccttcaccctgctggtgatcgacgag
tgtcaccgggtatcgctggacgcggactcctcctatcggcgggtcatcgaccatctgcgt
tctcgcaatccctcgctcaaggtgctgggattgaccgcgactccgtatcggctgggccag
ggcttcatctaccaccgccaccaccacggcatggtgcgcggtgacgcggacagcttcttt
ggcgactgcgtgttcgagcagccgctgcggctgatggtgcgccagggctacctggcaagc
ccgctcaaggtggatgcggcggtggcccgctacgacttctcgcaactgtcgccggggacc
ggtgggctatatcgcgaggaagagctcaatcgcgtggtggccgggcaccgggccacgccg
ggcatcatcgccgaggtgatcgagcgggcgcggcagcgcgagggggtcatgctgtttgcg
gcaagcgtggcccacgccgaggagatcctcggctatctgccggcacaggcctcggcactg
atcaccggcgataccgacagcgacgagcgcacccggctgatcgaggacttcaaggcgaaa
cggctcaagtacctggtcaacgtctcggtgctgaccaccggcttcgatgcgccccatgtg
gacctgatcgcgatcctcaggcccaccgagtccgtcggcctgtaccagcagatcgtcggg
cgggggctcaggctctcgcccggcaagcgcgactgtctgatcctcgactacgccggcaat
ccctgggacctgtatgcgccggaggtgggcagcccgcgaccggacagcgacagcgagccg
gtgcaggtgccctgtccgctgtgtggccacgccaacctgttctggggcaagcgcgatggc
gagctggtgatcgaacacttcggccgtcgctgccagggcctggtcgacgccgaaggcagg
gcgctggccgccgccgagccaggggcgcgccaatgcgactttcgttttcgcttcaagacc
tgcggcgactgtggcgccgagaacgatatcgccgcccgacgctgccacggttgccagacg
ctgctggtggacgccgacgacaagctgcgcgaggccttgaagctcaaggacgccagggta
ctgcgggtcagcggcatgctgctcgagtccaccgtcaatgggcgggggctgccgcggctc
aaggtcacctaccatgatgaggatggcgccaccctggccgagtggttcgcactggagacg
cccgcccagcggcgggccttcgaggcggtgtttctgcgtgatcacgcccgggcgcccggt
gtgccctggtcgccgacgtcacccgatcaggtatgtcgcgagcagcaaaggctcagggcc
ccggatttcgtggtcgggcgcaaggtggggcgtcactggcaggtgcgtgaaaagctgttc
gactaccgcggccgctatcgcaccgccgacagcgccgactga
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