Halomonas sp. DN3: NKF27_17180
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Entry
NKF27_17180 CDS
T10930
Symbol
bamA
Name
(GenBank) outer membrane protein assembly factor BamA
KO
K07277
outer membrane protein insertion porin family
Organism
hadn Halomonas sp. DN3
Brite
KEGG Orthology (KO) [BR:
hadn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03029 Mitochondrial biogenesis [BR:
hadn03029
]
NKF27_17180 (bamA)
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
hadn02000
]
NKF27_17180 (bamA)
Mitochondrial biogenesis [BR:
hadn03029
]
Mitochondrial protein import machinery
Outer membrane
TOB/SAM complex
NKF27_17180 (bamA)
Transporters [BR:
hadn02000
]
Other transporters
Pores ion channels [TC:
1
]
NKF27_17180 (bamA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Omp85
POTRA
POTRA_1
POTRA_2
POTRA_TamA_1
ShlB
YqfD
Motif
Other DBs
NCBI-ProteinID:
USZ49205
LinkDB
All DBs
Position
complement(3992884..3995232)
Genome browser
AA seq
782 aa
AA seq
DB search
MKIKTIGLATLLTACAQVAHAAPFTVSDIRVEGLQRVSAASVFNAFPVNARDRVDDSELA
EAARQLFATGLFEDIQLAREGDVLIIQVEERPTISALNIEGNSQIPDEDLRAGLKQAGIS
EGQVLQLSTIDEMKRELEGLYQSQGRYSARIDTELTPVGQGRVRVDININEGAVAKIRQI
NIVGNEAYSDEILLDEFELEDDPGLFFGWFSADEYSREALAGDLERLRSYYLDRGYVNFE
ITSSQVSISPDKSRIFITINVNEGNRYRVGDISFVGDLKVAEAEARELLQFESGDIFSRS
DVVASSEAMRSRLGAEGFAFAEVNGIPEVRSDGETVDLSFQVAPGRRAYVRRIQFVGNTT
TKDEVLRREMIQMESAPASTEAISQSRQRLERLGFFKQVQVQTEPVPGESDQLDVTYTVE
EQPSGSLSASLGFSQSAGVIYGASLSQNNFLGSGNRVNIGAQKSDTYTSVNFGFTDPYWT
LDGISRGYNFYYRATDYEDSDISTYSTDALGAGINFGYPINELTRMNFGANIEKLEIDTY
DDTPSEIKRYVLDEGDDASTLSATGSWTRNDLNRGIMPTAGNYQRLSLELGVPGSDAEYY
KARAQAKHFFPFNEEQTWSLKFSGQLGYADAINSSDPYPFYENFLAGGLGSVRGFTDNTL
GQLTTEREDGDDETLGGNVLLEGSMELIFPMPFVEDKRSVQPSLFVDAGNTFLTECYDVL
SEDEDRKKCNSGVEFSDIRYSVGVGVSWLTPVGPLTFSVAEPLNDEDEDDTQVFQFSLGQ
TF
NT seq
2349 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatcaagaccatcggattggcgacactcttgaccgcctgtgcccaggtggcgcac
gcggcccctttcaccgtgtcggacattcgcgtggaaggccttcaacgggtctctgcggct
tccgtcttcaatgcttttcccgtcaacgctcgcgatcgagtggacgacagtgaactggcc
gaagcggctcgccagctgtttgccaccggactgttcgaagatatccagctggcccgtgaa
ggcgacgtcctgatcatccaggtggaggagcgcccgacgatctcggcgctgaatatcgaa
ggcaactcccagattcccgacgaggacctgcgtgcgggcctcaagcaggccggcatcagc
gaaggccaggtgctgcagctctcgaccatcgacgagatgaagcgtgagctggaaggcctc
taccagtcccagggccgctacagcgcgcgcatcgacaccgagcttacgccggtgggtcag
ggccgggtgcgggtcgacatcaacatcaatgaaggtgcggtcgccaagatccgccagatc
aacatcgtcggcaatgaagcctattccgacgagatcctgctcgacgagttcgagctcgag
gacgatcccggtctgttcttcggctggttctccgccgacgagtactcccgcgaggcgctg
gccggtgacctggagcggctgcgttcctactacctcgatcgtggctacgtgaacttcgag
atcacctcgagccaggtatcgatcagccccgacaagtcgcgcatcttcatcaccatcaac
gtcaatgaaggcaatcgctaccgggtcggcgacatcagcttcgttggtgatctcaaggtg
gccgaggccgaggcccgcgagctgctgcagttcgaatccggtgatatcttctcgcgcagc
gacgtggtggcgtcctccgaggccatgcgctcgcgcctgggtgcggagggctttgccttc
gccgaggtcaacggtatccccgaggtgcgcagcgacggcgagacggtggacctgagcttc
caggtggcgccggggcgtcgcgcctacgtgcggcgtatccagttcgtcggcaacaccacc
accaaggatgaagtgctgcgccgcgagatgatacagatggagagcgcccctgcctccacc
gaggccatctcccagtcgcgccagcgcctcgagcgccttggcttcttcaagcaggtgcag
gtgcagaccgagccggtccccggcgagagcgaccagctcgacgtcacctacaccgtcgag
gaacagccctcaggctcgctgtcggcgagtctcggcttctcccagagtgccggcgtcatc
tacggcgcctcgctgtcccagaacaacttcctgggtagcggcaaccgggtcaatatcggc
gcccagaagagtgatacctacaccagcgtcaacttcggcttcaccgatccctactggacc
ctggacggcatctcccgcggctacaacttctactaccgggccacggactacgaagattcc
gacatctccacctactccaccgatgccctcggtgccgggatcaacttcggctacccgatc
aacgagctgacgcggatgaacttcggcgccaatatcgagaagctcgagatcgacacctac
gacgacaccccgtcggagatcaagcgttacgtgctcgacgagggtgacgacgccagtacc
ctgtcggccaccggcagctggacccgcaacgacctcaaccgcggcatcatgccgacggcg
ggtaattaccagcggctgtcgctggaactcggggtgcccggcagtgacgccgagtactac
aaggccagggcccaggccaagcacttcttcccgttcaacgaagagcagacctggtcgttg
aagttcagtggccagctgggctacgccgatgccatcaactcgagcgatccctatccgttc
tacgagaacttcctcgccggtggcctgggctcggtgcgtggtttcaccgacaacaccctt
ggccagctcaccaccgaacgtgaggacggtgatgacgagaccctcggcggtaacgtgctg
ctcgagggcagcatggagctgatcttcccgatgccgttcgtcgaggacaagcgctcggtg
cagccgtcgctgttcgtcgatgccggtaacaccttcctcaccgagtgctacgacgtgctg
tccgaggacgaggatcgcaagaagtgcaactccggggtggaattcagcgatatacgctac
agtgtgggcgtgggcgtctcctggctgacgccggtgggtcccctgaccttcagcgtggcc
gagccgctcaatgacgaggacgaggacgacacccaggtgttccagttctcgctgggtcag
accttctga
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