Halomonas sp. DN3: NKF27_18435
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Entry
NKF27_18435 CDS
T10930
Symbol
phrB
Name
(GenBank) deoxyribodipyrimidine photo-lyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
hadn Halomonas sp. DN3
Brite
KEGG Orthology (KO) [BR:
hadn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hadn03400
]
NKF27_18435 (phrB)
Enzymes [BR:
hadn01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
NKF27_18435 (phrB)
DNA repair and recombination proteins [BR:
hadn03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
NKF27_18435 (phrB)
Prokaryotic type
NKF27_18435 (phrB)
BRITE hierarchy
SSDB
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Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-ProteinID:
USZ49442
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All DBs
Position
4275428..4276858
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AA seq
476 aa
AA seq
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MPVTLVWFRSDLRIHDNTALYHAARRGPVIGVFLHAEQQWREHGHGDNKLDFLCRGVEAL
GEALAERNIPLIQRQVARFDDAPQVLMALAEELGADALYFNREYPLDEVKRDQAVLAQAE
HSGLEARALRDAVAFSPGELLTGKGGYYGVFTPFAKAWHKAISAERLEVLDPPERQAPLE
LSSSASRRPDYPNKSVDGRHWPAGEEAASDRLSRFLRGFPDSPAKRYKEQRDFPARRGTS
ELSPYLALGMISWRQCMQAVMAINDGSLSDGDAGLTAWVSELVWREFYQHVATGFPRVCR
HRAFQRHTEALDWRDAPEDFAAWCEGRTGYPLVDAAMRQLVATGWMHNRLRMVTAMFLSK
HLLIDWRRGERFFLEHLVDGEFAANNGGWQWAASTGTDAAPYFRIFNPTTQSERFDPEGE
FIARWVPELASLAPKKRHAPTRDLLTDLDYPAPIVDHRAARERALDAFKSLSKDAG
NT seq
1431 nt
NT seq
+upstream
nt +downstream
nt
atgcctgtcactctggtctggtttcgcagcgatctgcgtattcacgacaatactgcgctt
taccacgccgcccgacgcggcccggtcatcggtgtctttctgcacgccgagcagcagtgg
cgcgaacatggccacggcgacaacaagctcgactttctgtgtcgtggcgtggaggccctg
ggcgaagccctggccgagcgcaatatcccgttgatccagcgacaggtagcgcgcttcgac
gacgctccccaggtgctgatggcgctggccgaggagctcggcgccgacgccctctatttc
aatcgcgagtaccctctcgatgaggtcaagcgcgaccaggcggtgctggcgcaggccgag
cacagcggcctcgaggcgcgtgccctgcgcgacgccgtggccttcagtcccggcgagctg
ctgaccggcaagggcggctactacggcgtcttcacccccttcgccaaggcctggcacaag
gccatcagcgccgagcgactcgaggtgctggacccaccggagcgccaggcgccgctggag
ctgtcctccagcgccagccggcgccccgactatccaaacaagagcgtggatggtcgccac
tggccggccggcgaggaggccgccagtgaccgcctgtcgcgctttctgcgaggtttccct
gacagcccggcgaagcgctacaaggagcagcgggacttcccggccagacgcggcaccagc
gagctatcgccctatctggcgctgggcatgatctcctggcgtcagtgcatgcaggcggtg
atggcgatcaacgacggtagcttgagcgacggcgacgccggcctgaccgcctgggtcagc
gaactggtgtggcgagagttctaccagcacgtggccacaggcttccccagggtatgccgc
catcgggcctttcaacgccacaccgaggccttggactggcgcgatgcccccgaggatttt
gccgcctggtgcgaaggacgcaccggctatccgctggtcgacgccgccatgcgccagctg
gtcgctaccggctggatgcacaatcgcctgcgcatggtgaccgccatgttcctgtccaag
cacctgttgatcgactggcgacgtggagagcgattcttcctcgagcacctggtcgacggt
gaattcgccgccaacaacggcggctggcagtgggcggcgtccaccggtaccgacgccgcg
ccctacttccgcatcttcaaccccaccacccaatccgaacgcttcgatcccgaaggcgaa
ttcatcgcgcgctgggtgccggagcttgcatcactggcgccgaagaagcgacatgccccg
acccgggatctgctcaccgacctcgactaccccgcccccatcgtcgaccaccgcgccgcc
cgcgagcgcgcactcgacgccttcaagagcctgtcgaaggacgcgggataa
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