Halomonas sp. DN3: NKF27_19870
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Entry
NKF27_19870 CDS
T10930
Name
(GenBank) Ig-like domain-containing protein
KO
K20276
large repetitive protein
Organism
hadn Halomonas sp. DN3
Pathway
hadn02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
hadn00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
NKF27_19870
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Gene cluster
GFIT
Motif
Pfam:
Big_6
Big_13
BapA_N
Big_3_3
Big_3_5
Glucodextran_B
CshA_repeat
Big_9
Motif
Other DBs
NCBI-ProteinID:
USZ49710
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Position
complement(4615876..4617600)
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AA seq
574 aa
AA seq
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MTVKVSRLEEELSEAVAWEVEGELVLETSSKVLLDISPEDIASLVRDGDDLIVEMANGQT
LKIVGFYTDAGAGQSELYLVDDEGGVVWADLAPAADNGVVAAQYVPQPDMAGFEMVAAAE
EGGSGWTGAAILGGAAAAGLAAAAAGGGGGGGGSDDDGDAPASDDGSDSDDDSDSGDDSG
DDSDQDNDDSTDETAPSAPQIGAIRDDQGDVTGPLASGDSTDDTTPTLSGSAEAGSTITI
RDGDAVLGTVIADDSGNWSFTPSEPLAEGSHSLTVTATDAAGNTSEASDAVELTVDTAAP
DVPTLNPSDGTVISGSAEPGSTIEVDLDGDGTADLTVTADETTGEWSVEPSSPLADASDV
TVTATDAAGNTSPEASLTVDAAAPATPIIAQVVDDEGDDTGPLSSGDSTDDATPTLSGVA
EAGSTVTIKDGDTVLDSITVDDSGSWSFTPSEPLADGSHSLTVTSTDAAGNTSESSGAFE
LNVDTSAPTAPLINPTDGTVISGKAEPGCMVEVDIGGDGTTMMQVEVDPTTGDWSVAPST
PLADDTMVVALAIDEAGNVSPEVTVEVDTALVDT
NT seq
1725 nt
NT seq
+upstream
nt +downstream
nt
atgactgtcaaggttagccgtctggaagaggaactttccgaggctgtcgcgtgggaggtc
gagggagaactcgttctcgagacatcaagcaaggtattgctggacatcagtccagaggat
attgcctcccttgtcagagacggtgacgacctgatagtcgagatggccaacggccagacc
ctgaagatcgtcgggttctataccgacgctggcgcaggacagagcgagctttacctggtt
gatgatgaaggtggcgtcgtctgggctgacctggcgccggccgccgacaacggcgtcgtt
gccgcgcagtacgttccccagcccgacatggcaggcttcgagatggtggctgcggctgaa
gagggtggcagcggctggaccggcgctgcgattcttggcggcgccgccgctgcgggcctg
gctgctgcggccgccggtggcggcggtggtggtggcggcagcgacgatgacggcgacgcc
ccggccagtgatgacggcagcgatagcgacgacgacagcgacagcggcgacgacagcggc
gacgacagcgatcaggataacgacgacagcaccgatgagaccgctccgtcggccccgcag
atcggcgccatacgcgatgatcagggcgatgtcaccgggccacttgccagcggcgacagc
accgacgataccaccccgacgctgtccggcagcgcagaggcgggcagcaccatcaccatt
cgtgacggcgacgcggtgctggggaccgtcatcgcggacgacagcggcaactggagcttt
acccccagcgagccgctggccgagggcagccatagcctgacggtcaccgccaccgatgcc
gccggcaacacctcggaggcgagcgatgccgttgagctgacggtcgataccgctgcgccc
gacgtgccgaccctgaacccgagtgatggcaccgtcatcagcggcagtgccgaacccgga
agcacgatcgaagtcgaccttgacggtgatggtacggcggatctgacggtcaccgcggat
gagacaaccggcgagtggtcggtggagccttcttcgccgctggctgacgcttctgacgtc
acggtgacggcgaccgacgcggcgggcaacacaagcccggaagcgtcgttgacggtggac
gccgctgccccggcgaccccgatcattgcacaggtcgtggatgacgaaggcgacgacact
gggccgctttccagtggtgacagcacagacgacgccaccccgacgctttccggtgtcgcc
gaggcgggtagcacggtgaccatcaaggatggcgacacggtgctcgattccatcaccgtc
gatgacagcggaagctggagctttaccccctcggagcctctcgccgacggcagccatagc
cttaccgtcacctcgaccgacgctgccggcaacacctcggagtcgagcggcgccttcgag
ttgaacgtggataccagcgcgccaaccgcgccgctcatcaatccgaccgatggcaccgtg
atcagcgggaaagccgagccgggttgcatggtcgaggtcgacattggcggcgatggcacc
acgatgatgcaagtcgaggtggacccgacgaccggtgactggtcggtggcgccgtctact
ccgttggccgacgacaccatggtggtagcgttggcgatcgacgaggcgggtaacgtcagt
ccggaagtcacggtagaggtggataccgccctggtggacacctag
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