Halomonas sp. DN3: NKF27_20395
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Entry
NKF27_20395 CDS
T10930
Name
(GenBank) exodeoxyribonuclease III
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
hadn Halomonas sp. DN3
Pathway
hadn03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
hadn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
NKF27_20395
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hadn03400
]
NKF27_20395
Enzymes [BR:
hadn01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
NKF27_20395
DNA repair and recombination proteins [BR:
hadn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
NKF27_20395
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Exo_endo_phos
Motif
Other DBs
NCBI-ProteinID:
USZ49803
LinkDB
All DBs
Position
4735938..4736705
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AA seq
255 aa
AA seq
DB search
MKIATINVNGIREAVGRGFLDWLANQDADVVCVQNIKAKSFELDDSILYPEGYEGYFLDA
EQDGFSGVGLYCRKIPKAIMYGLGFPQCDHEGRFLQADYDRFSIASFLMPDGSDPDAKQA
FMAQYQEYLSKMARKRREYIICGTWHIAHKTIDLANWADNQTTPGFKAEERAWMDQVFGP
TGFIDTFREINRDGDEYTWWPALDQDQPRSRQEGWRLDYQIVGPNFRRHITDAWIDYDAT
FSEFAPLIVEYDLQL
NT seq
768 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatcgccaccatcaatgtaaacggcatccgcgaggccgtcggtcgaggctttctc
gactggctcgccaaccaggacgccgacgttgtctgcgtccagaacatcaaggccaaaagc
ttcgagctggacgacagcattctttatcctgagggctacgagggttacttcctcgacgcc
gaacaggacggtttctcaggggtcggcctctactgccgcaagatccccaaggccatcatg
tacggcctgggcttcccccagtgcgaccatgaaggacgctttctgcaggccgactacgat
cgcttctcgatcgccagcttcctgatgcccgacggcagcgatcctgacgccaagcaggcg
ttcatggcccagtaccaggagtacctgtcgaagatggctcgcaagcgccgcgagtacatc
atctgcggcacctggcacatcgcccacaagaccatcgatctggccaactgggccgacaac
cagacgacgcccggcttcaaggccgaagagcgcgcctggatggaccaggtgttcggcccc
accggcttcatcgacaccttccgcgagatcaaccgcgacggtgacgagtacacctggtgg
ccggcgctggaccaggatcagccgcgctcccgtcaggagggctggcgcctggactaccag
atcgtcgggccgaacttccgtcgccatatcaccgacgcctggatcgactacgacgccacc
ttctcggagttcgcgccgctgatcgtcgagtacgacctgcaactgtaa
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