Halohasta litchfieldiae: halTADL_0177
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Entry
halTADL_0177 CDS
T05239
Name
(GenBank) putative DNA binding protein
KO
K06930
HTH-type transcriptional regulator, bacterioopsin transcriptional activator and related proteins
Organism
hae
Halohasta litchfieldiae
Brite
KEGG Orthology (KO) [BR:
hae00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
hae03000
]
halTADL_0177
Transcription factors [BR:
hae03000
]
Prokaryotic type
Helix-turn-helix
Other families
halTADL_0177
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BAT
HTH_10
GAF_2
PAS_4
GAF
GAF_3
Sigma70_r4
HTH_24
GerE
Sigma70_r4_2
Motif
Other DBs
NCBI-ProteinID:
ATW86999
UniProt:
A0A1H6T4V4
LinkDB
All DBs
Position
169137..170837
Genome browser
AA seq
566 aa
AA seq
DB search
MYLYANDSFQLYDGKRVSTMYQYGLIPVGPRNRNMSNRMQLLGESLDALPVNVSVLDPEG
MILQTNQSWQEFGEQNGIRMRPDTAGVNYLNVCDRSKTETATAARRGLTELLAGERQQFQ
LEYPCHSPVEQRWFLLVAVPVILDQKRHAVVAHINITDQKRRERQLEAEVARLEALTDLT
AAVREITQTVISQSTRSEIEQAVCDQLAGANGYDCARIGEVDGRTGRFTVRASAGRFGSI
QECTESDELFGATVIREAVWTGQLQTTTHRRENTAFDWRQDAPPVATKRAVAAVPIRHAE
TLYSVLTIYTVRPDAFSTEERTTLSELGEVVGHAIAASERTQALMSDELIEVELRIRDLF
PHESPSTDWTVEITQTVAGPDDDYTMYGTTTEAEIEAVAAVIDPLDVAAVTVIGGSGESV
RIALRLSQQCVIPLLASHGWSTETAVLSNGDCYLTVHLPSGDNVREMVETVCEVFPNTEL
LARRQIHVDSQVDMEIQESAVAELTNRQRTVLQTAYAAGYFQWPRDATGAEIAESLGIAP
PTFHQHLRVGQQKLMDTIFGELPVAV
NT seq
1701 nt
NT seq
+upstream
nt +downstream
nt
atgtatctgtatgcaaacgactcttttcaactgtatgatggaaaaagagtgtctactatg
tatcagtatgggcttattcccgtcggtccccgaaacaggaatatgagcaatcgcatgcag
ttgttgggagaatcactggatgcgctcccggtgaacgtctccgtgttggaccccgaggga
atgatcctccagaccaatcaatcgtggcaggagttcggcgaacaaaacgggattcggatg
cgaccggataccgccggtgtcaactatctaaacgtctgtgaccggtcgaagacggagaca
gcgacagccgcacgccgggggctcacggagctactcgcaggggaacgccaacagttccag
ctggagtacccctgtcattcgccggtcgaacagcgctggtttctgctcgtggcggtgccg
gtgatactcgatcaaaagcgacacgctgtcgtcgcccacatcaacatcaccgaccagaaa
cgccgcgagcggcaactcgaagcggaggtcgcgcgtctggaagcgctcaccgatctcacg
gctgcggtcagagagatcacccagaccgtcatcagccagtcgacgcggtcggagatcgaa
caggcagtctgtgaccaattggccggagcaaacggctacgactgtgcgcggatcggcgag
gtcgacggccgaaccgggaggttcactgttcgagccagtgcgggccgctttggatcgatc
caggagtgcaccgagtccgacgagctgttcggtgcgaccgtgattcgggaagcggtctgg
accggacagctacagacgaccacccacaggcgggaaaacacggccttcgactggagacag
gacgcgccaccggtcgcgacaaagcgtgccgttgcggcggtgccgatcaggcatgccgag
acgctgtacagcgtcctcacgatctatacggtgcgacccgacgccttcagcaccgaggag
cgaaccacgctctcggaactcggggaggtcgtcggccacgcaatcgctgccagcgagcgg
acacaggccctgatgagcgacgagctcatcgaggtcgaactccggattcgggatctgttt
ccccacgaatccccgtcgaccgactggaccgttgagatcacccaaaccgtcgctggcccg
gatgacgactacacgatgtacggaacgacgaccgaagccgagatcgaggcggttgccgca
gtcatcgatcccctggatgtggcggcggtgaccgttatcggcggttcgggtgagtcggtt
cggatcgcactccgactctctcagcagtgtgtgatcccgctgctcgcatcgcatggctgg
tcgaccgagacggcagtgctctccaacggcgactgttatctgacggtccatctcccctcg
ggtgataacgttcgagagatggtcgagaccgtttgtgaggtatttcccaacacggaactg
ctggcccgcaggcagatccacgtcgactcacaggtcgacatggagatccaggagtcggcg
gtggccgaactcaccaaccgccagcgaactgtgctccagaccgcctacgcggcgggctac
ttccagtggccgcgggacgcaaccggcgcggagatcgccgagagcctcgggatcgcgccg
ccaacctttcaccagcacctccgcgtcggacagcagaaactcatggacacgatcttcgga
gagctaccagtcgcagtttaa
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