Halohasta litchfieldiae: halTADL_0530
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Entry
halTADL_0530 CDS
T05239
Name
(GenBank) sugar-specific transcriptional regulator TrmB
KO
K23356
HTH-type transcriptional regulator, sugar sensing transcriptional regulator
Organism
hae
Halohasta litchfieldiae
Brite
KEGG Orthology (KO) [BR:
hae00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
hae03000
]
halTADL_0530
Transcription factors [BR:
hae03000
]
Prokaryotic type
Helix-turn-helix
Other families
halTADL_0530
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TrmB
DUF4350
E2F_TDP
Regulator_TrmB
MarR_2
HTH_IclR
GntR
HTH_20
DUF2250
Motif
Other DBs
NCBI-ProteinID:
ATW87334
UniProt:
A0A1H6WIQ7
LinkDB
All DBs
Position
complement(520474..521292)
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AA seq
272 aa
AA seq
DB search
MTAEQHKAETVSLLQDLGLKEYEAQSFLALTQLTTGTAKEISEISEVPRTRVYDAVRVLE
SKGLVEVQHSSPQQFRAVSIEEATAILHQQYDTRIDDLQSHLEALDLQPEIDDSDRMQEV
WALSDHNAIESRTHTVLEDAESEIVLLVVEEELLTEALYDRLHDAVDRGVDVIVGGETDA
IIAKLDTELPSVKAFETELDWLLGPASDDEIAISRLLLVDRTTLLVSSFYPDDDHDESHE
QAVFANGLENGIVVLLRRIISSGVLPVATPTR
NT seq
819 nt
NT seq
+upstream
nt +downstream
nt
atgaccgctgagcaacataaagcggagacggtgagtctgttgcaggacctcgggttgaag
gagtacgaggcgcagagtttcctggcattgacccaactcaccacggggactgccaaggaa
atcagcgagatctcggaggttcctcggacccgggtgtacgacgccgtccgagtgctggaa
tcgaaggggctggtcgaagtacagcattccagcccgcagcagtttcgcgcggtcagcatc
gaggaggcaaccgcgatcttgcatcagcagtacgacacgcggatcgacgacctccagtca
cacctcgaagcgctcgatctccaaccagagatcgacgacagcgaccgaatgcaggaggta
tgggcgctatccgaccacaacgccattgagtcccgaacacacacggtgctggaggacgcc
gaatcggagatcgtcctgctggtcgtcgaggaggagctcctgacagaggcgttgtacgat
cggctccacgacgcagtcgaccgcggcgtcgacgtgatcgtcggtggcgagacggacgcg
atcatcgccaagctcgataccgagctgccatccgtgaaggcgttcgaaaccgaactggac
tggctcttgggacccgcgagcgacgacgagatcgccatcagccgcctgctattggtcgac
cgcacaacgttgctggtcagttccttctacccggacgacgaccacgacgaatcacacgag
caggcggtcttcgccaacggcctggagaacggtatcgtcgtcctccttcgccggataatc
tcctcgggggtgctccccgtggcgaccccgacgcggtag
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