Halohasta litchfieldiae: halTADL_0601
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Entry
halTADL_0601 CDS
T05239
Name
(GenBank) tRNA pseudouridine38-40 synthase
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
hae
Halohasta litchfieldiae
Brite
KEGG Orthology (KO) [BR:
hae00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
hae03016
]
halTADL_0601
Enzymes [BR:
hae01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
halTADL_0601
Transfer RNA biogenesis [BR:
hae03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
halTADL_0601
Prokaryotic type
halTADL_0601
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
TetR_C_6
Motif
Other DBs
NCBI-ProteinID:
ATW87404
UniProt:
A0A1H6UQ42
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All DBs
Position
588924..589766
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AA seq
280 aa
AA seq
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MRAFRLAYDGRPFYGFQRQPDVPTVEDTLFDALRSLSVLSTDASRPVGYAAAGRTDTGVS
AVAQTVAFDAPEWLKPRVLNSELPGTIRAWASADVDDDFHATHHAVRREYSYRLYAPQHE
AQSFDGRPPVDADRAAAALTALCGSHDFHNLTPDDEGTRRGLSGWVDRDGEFLLIEFAAG
GFARELVRRLVSVIRLVGTGHRDVAWIENLLGPEPVEQRPPAAPPEPLLLSDVRYPGVDF
ERDPEAAESGAVAFGERAIESQARSRVSRAVVDRLRGGDQ
NT seq
843 nt
NT seq
+upstream
nt +downstream
nt
atgcgtgcgtttcgtcttgcctacgatggtcgccctttttatggctttcagcgacagccc
gacgttccaaccgtcgaggacacgctgttcgacgctcttcggtcactgtcggtgctgtcg
actgacgccagtcgaccagtggggtatgcggcggcgggccgaactgacaccggggtgtcg
gcagtcgcccagacggtcgcgtttgacgccccggaatggctcaagccacgcgtgctcaac
agcgaactccccggcacgatccgggcgtgggccagcgccgatgtcgacgacgactttcat
gcgactcaccacgcggtccgccgggaatacagctaccggctatatgcgccacagcatgag
gcccaaagttttgacggtcgaccgccagtcgacgcggatcgggcagcagccgcgcttacg
gcactctgtggcagccacgatttccacaacctgaccccggacgacgaggggacccgacgc
gggctctcgggctgggtcgaccgcgatggcgagtttttgctcatcgagttcgcggctggt
ggcttcgcccgcgaactcgtccgtcgactcgtctcggtgattcgactcgtgggaactggc
caccgagatgttgcatggatcgagaatctcctcggccccgagccagtcgaacagcgtcca
cctgcggcgccacccgagccactgttgctttcggatgttcggtatccgggcgtcgacttc
gagcgagacccggaagccgccgagagtggggccgtcgccttcggcgagcgggccattgaa
tcgcaggcccggtcacgtgtctcgcgggcagtcgtcgaccgactccgcggtggcgaccag
taa
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