Halohasta litchfieldiae: halTADL_0618
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Entry
halTADL_0618 CDS
T05239
Name
(GenBank) DNA-directed RNA polymerase subunit B'
KO
K03044
DNA-directed RNA polymerase subunit B' [EC:
2.7.7.6
]
Organism
hae
Halohasta litchfieldiae
Pathway
hae03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
hae00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
halTADL_0618
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hae03021
]
halTADL_0618
Enzymes [BR:
hae01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
halTADL_0618
Transcription machinery [BR:
hae03021
]
Prokaryotic type
Archaeal type
RNA polymerase
Core subunits
halTADL_0618
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_7
RNA_pol_Rpb2_4
RNA_pol_Rpb2_5
Motif
Other DBs
NCBI-ProteinID:
ATW87421
UniProt:
J7GUP9
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All DBs
Position
605466..607292
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AA seq
608 aa
AA seq
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MAQAREAKVYVNGSLVGTHPDPEQLAEQIREARRRGDVSDMVNVSVRGRTQEVIINADAG
RARRPLIVVENGEPLLGDEEIEAVDEGDLEFEDLVDRGYVEFIDAEEEEDILIGVDEDDL
TDKHTHLEIDPSLIFGIGAGMIPYPEHNASPRITMGAGMMKQSLGLPSANYRIRPDTRQH
LLHYPQLSMVKTQTTDQINYDERPAAQNFTVAVMSYEGFNIEDALVMNQGSVDRALMRSH
FFRTYEGEERRYPGGQEDHFEIPSQDVRGARGEDAYTHLDDDGLVNPETVVDENSVLLGK
TSPPRFLEEPDDMGGLSPQKRRETSVTMRSGEDGVVDTVTLMEGEDGSKLSKVKVRDERI
PELGDKFASRHGQKGVVGHLAPQEDMPFTEEGLVPDLVLNPHALPSRMTVGHVLEMLGGK
VGALEGRRVDGTPFQGEDEEELRGALEDHGFKSSGKEVMYSGVTGEKIDAEIFVGTIFYH
KLYHMVSNKLHARSRGPVQVLTRQPTEGRAREGGLRVGEMERDTIIGHGAAMVLNERLLD
SSDKETVYVSADTGMIAVQDREQRRVYDQVTGSEDNIHELEVSYAFKLLLDELMALGIRP
TLELEDAV
NT seq
1827 nt
NT seq
+upstream
nt +downstream
nt
atggctcaggcacgagaagcgaaagtatacgtcaacggtagtctggttggaacccacccg
gaccccgaacagctcgccgaacagatccgagaagcccgccgccgcggcgacgtctcggac
atggtcaacgtctcggtccgtggtcggacccaagaggtcatcatcaacgccgatgctggc
cgggcccgccgcccactgatcgtcgtcgaaaacggcgaaccgctcctcggtgacgaggaa
atcgaggccgtcgacgagggcgacctcgaattcgaggacctcgtcgaccgcggctacgtc
gagttcatcgacgccgaagaggaagaagacatcctgatcggtgtcgacgaagatgacctc
accgacaagcacacccacctcgaaatcgatccgtcgctgatcttcgggatcggtgcaggg
atgattccgtatccggaacacaacgccagtccccggattacgatgggcgcagggatgatg
aaacagtcgctggggctgccatccgccaactaccggatccgacccgacacgcgtcagcac
ctcctgcactacccgcagctctcgatggtcaaaacccagaccaccgatcagatcaactac
gacgagcgacccgccgcccagaacttcacggtcgccgtcatgagctacgaagggttcaat
atcgaggacgcactcgtgatgaaccaaggctcggtcgaccgcgcgctcatgcggtcgcac
ttcttccgcacctacgagggcgaggaacgacgctaccccggcggtcaggaagaccacttc
gagattccaagtcaggatgtccgcggcgcacgcggggaagacgcctacacgcatctcgac
gacgacgggctcgtcaaccccgagacggttgtcgacgagaattcggtcctgctcggcaag
accagcccaccgcggttcctcgaagaacccgacgatatgggcggtcttagcccgcagaag
cggcgtgagacttcggtgacgatgcgttcgggcgaggacggcgtcgtcgacacggtcacg
ctgatggagggcgaagacggctcgaagctctcgaaggtcaaagttcgagacgagcgaatc
ccagagcttggtgacaagttcgcctcccggcacggccagaagggtgttgtgggccacttg
gcaccacaggaagatatgccgtttaccgaggaaggactcgttcccgacctcgtgctgaac
ccacacgcactcccatcgcggatgactgtgggccacgtgctggaaatgctcggcgggaag
gttggtgcgctcgaaggacggcgcgtcgacgggacgccgttccagggcgaagacgaagag
gaactccgtggcgcactcgaagaccacggcttcaaatcctccggcaaggaggtcatgtat
tcgggtgtgacgggtgagaaaatcgacgccgagattttcgtcggcacgattttctaccac
aaactctaccacatggtctcgaacaagctgcacgcccgctcccgcgggcctgtgcaggtg
ctgacccgccagccgaccgaggggcgtgcccgtgagggtgggctccgtgtcggtgagatg
gagcgggataccatcatcggtcacggtgcggcgatggtgctcaacgaacgcctgctggat
tcctcggacaaagagacggtgtacgtctcggccgatacaggcatgatcgcggtccaggac
cgcgaacagcgccgtgtctacgatcaggtgaccggcagcgaggacaacatccacgaactc
gaagtcagttacgcgttcaaactcctcctggacgaactgatggcgctcggcattcgacca
acactcgaacttgaggacgcagtctaa
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