Halohasta litchfieldiae: halTADL_0619
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Entry
halTADL_0619 CDS
T05239
Name
(GenBank) DNA-directed RNA polymerase subunit A'
KO
K03041
DNA-directed RNA polymerase subunit A' [EC:
2.7.7.6
]
Organism
hae
Halohasta litchfieldiae
Pathway
hae03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
hae00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
halTADL_0619
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hae03021
]
halTADL_0619
Enzymes [BR:
hae01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
halTADL_0619
Transcription machinery [BR:
hae03021
]
Prokaryotic type
Archaeal type
RNA polymerase
Core subunits
halTADL_0619
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
RNA_pol_Rpb1_5
HTH_3
HTH_24
HTH_31
Sigma70_r4
MnmE_helical
Motif
Other DBs
NCBI-ProteinID:
ATW87422
UniProt:
A0A1H6UPX6
LinkDB
All DBs
Position
607306..610224
Genome browser
AA seq
972 aa
AA seq
DB search
MSMQTPKQLGGIRFGLMDPETYRDMSATKVITADTYNDDGYPIDMGLMDPRLGVIDPGLE
CRTCGQHSGSCPGHFGHIELAAPVIHVGFTTLMRRLLRATCRECGGLTLTEDKKEQFREN
LVRAEELGKDPDTVLKNAVREARKSNTCPHCGNPQADIKHEKPTTYYEVEDVLASEYSEV
IAEAMQPDEDDEDDEGISPSELADQTGISLERINQILGGEFRPLDEDRRALEKALDVDLT
EEDMNKLMPSDIRDWFEDIPDSDIEVLGIDSENSRPEWMIMTVLPVPPVTARPSITLDNG
QRSEDDLTHKLVDIIRINQRFMENREAGAPQLIIEDLWELLQYHVTTFVDNEISGTPPAR
HRSGRPLKTLSQRLKGKEGRFRGSLSGKRVNFSARTVISPDPTLSLNEVGIPDRVASEMT
ITINVTDRNTEEARQYVANGPEKHPGANYVKRPDGRRLKVTPKNCEELSTKIEEGWEVNR
HLVDGDIVIFNRQPSLHRMSIMAHEVVVMPYKTFRLNTVVCPPYNADFDGDEMNLHALQT
EESRAEARVLMRVQEQILSPRFGENIIGAIQDHISGTYLLTNDNPHFTETQALDLLRATR
VDELPDPDGEDETGPYWTGRTVFSLLLPDGLNLEFTSSTGGDVIIEDGVLLEGTIDEDAV
GAFGGEIVDTIVKQYSETRARVFINEVAALAMRAIMHFGFSIGIDDESIPPVADEQVDEA
IDSAYDRIEELIDTYEAGELESLPGRTVDETLEMKIMQTLGKARDSAGEIADDHFADDNP
AVIMARSGARGSMLNLTQMAGCVGQQAVRGERINRGYEDRTLAHYEPNDLSAEAHGFVEN
SYRSGLTPREFFFHAMGGREGLVDTAVRTSKSGYLQRRLINALSELEAQYDGTVRDTSGT
VIQFEFGEDGTSPVRVSSDEDFDIDVEGITDRVVDAEFGSESEKEAFLGRREPPTNLSER
SEPRFEEVESDD
NT seq
2919 nt
NT seq
+upstream
nt +downstream
nt
atgtcaatgcaaacaccaaaacagctcggtgggatccggttcggtctgatggatcccgag
acgtaccgcgacatgtcggccacgaaagtgattacggccgacacctacaacgacgacggc
taccccatcgacatggggctgatggacccccgactcggcgtcatcgaccccggtctcgaa
tgccgaacctgcggccagcactcgggttcgtgtcccggccacttcggccacatcgaactc
gccgcgccggtcatccacgtcggcttcacgacgctgatgcgtcgactcctgcgggcgacc
tgtcgggagtgcggcggactgacgctgaccgaagacaaaaaagagcagttccgcgagaac
ctcgttcgcgcggaggaactcggcaaagaccccgacacggtgctcaaaaacgccgttcga
gaggcacggaaatccaacacctgtccacactgtggcaacccacaggccgacatcaaacac
gagaagccgacgacctactacgaggtcgaagacgtgctggcctcggagtactccgaagtc
atcgccgaggcaatgcagcccgacgaggatgacgaagacgacgaggggatcagtccctcg
gagttggccgaccagaccggcatctcgctggaacggatcaaccagatcctcggcggcgag
ttccgcccgctcgacgaggaccgacgggccctcgaaaaggcactcgacgtcgacttgacg
gaagaagatatgaacaaactgatgccctcggatattcgcgactggttcgaggacatcccg
gattcggatatcgaagtactgggcatcgactcggagaactcccggccggagtggatgatc
atgaccgtgctgccggtgccgccggtcacagcccgcccatcgatcaccctcgacaacggc
cagcgctccgaggacgacctcacgcacaagctggtcgacatcatccgcatcaaccagcgg
ttcatggagaaccgcgaggcaggagccccacagctgattatcgaggacctctgggagctg
ctgcagtaccacgtgacgaccttcgtggacaacgagatttccggaactccaccggcccga
caccgctcgggtcgacccctcaaaaccctcagccagcgcttaaaaggcaaagaggggcgg
ttccgcggctcgctgtcggggaaacgcgtcaacttctcggcgcgtaccgtcattagcccc
gacccgacgctgagcctcaacgaggtcgggattccggaccgcgtggccagcgagatgacg
atcacgatcaacgtcaccgaccgcaacaccgaagaggcccgccagtacgtcgccaacggc
cccgagaaacatcccggtgccaactacgtcaaacggcccgacggtcgacggctgaaggtc
acgccgaagaactgcgaagaactatcgacaaaaatcgaggaaggctgggaggtcaaccgc
cacctcgtcgacggcgacatcgtgatcttcaaccgccagccgtcgctgcaccgaatgagt
attatggcccacgaggtcgtcgtgatgccgtacaagaccttccggctcaacacggttgtc
tgtccgccgtacaacgctgacttcgacggcgacgagatgaacctccacgccctccagacc
gaggagtcccgtgccgaggcccgtgtgctcatgcgcgtccaagagcagatcctctcgccg
cgcttcggcgagaacatcatcggggcgattcaggaccacatttcggggacctacctgctg
accaacgacaatccccacttcaccgagacacaggcactcgacctgctccgagcgacccgc
gtcgacgagttacccgaccccgacggcgaggacgagaccggtccctactggaccggtcgg
accgtcttctcgctgctccttccggacggcctgaatctcgagttcacctcgtcgaccggc
ggcgacgtgatcatcgaggacggcgtgctgctcgaagggacgatcgacgaggacgctgtc
ggcgccttcggcggcgagatcgtcgacactatcgtcaaacagtactcggagacacgcgcg
cgagtgttcattaatgaggtcgccgcgctggcgatgcgggcgatcatgcacttcgggttc
tcgatcgggatcgacgacgagtcgattccacccgttgcggacgagcaggtcgacgaggca
atcgacagcgcctacgaccgaatcgaagagctgatcgacacctacgaggccggcgaactc
gaatcgctccccggccgaacggtcgacgagacgctcgaaatgaagatcatgcagacgctc
ggcaaagcccgggactccgccggtgagatcgccgacgaccacttcgccgatgacaacccg
gcagtcatcatggcccgttccggggctcggggttcgatgctcaacctcacccagatggcc
ggctgtgtcggccagcaggcagtccgtggcgaacgaatcaatcggggttacgaggatcga
accctcgcccactacgagccgaacgatctgtccgcggaggcccacggcttcgtcgagaac
tcctaccgaagcggtctcaccccgcgtgagttcttcttccacgcgatgggtggccgcgag
gggctcgtcgatacggcagtccggacgtcgaaatccgggtacctgcagcgccgactgatc
aacgcgctgtctgaactcgaagcccagtacgacggtaccgtgcgggacacctctggaacg
gttatccagttcgagttcggtgaggacggtacctcgccggtgcgtgtctcttccgacgag
gacttcgatatcgacgtcgagggaattacggatcgcgttgtcgacgcggagttcggcagc
gagagcgaaaaggaggcattcctcggtcggcgcgagccgccgacgaacctctcagagcgt
agtgagccgcggttcgaggaggtggaatccgatgactga
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