Halohasta litchfieldiae: halTADL_0841
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Entry
halTADL_0841 CDS
T05239
Name
(GenBank) transcription initiation factor TFIIB
KO
K03124
transcription initiation factor TFIIB
Organism
hae
Halohasta litchfieldiae
Pathway
hae03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
hae00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
halTADL_0841
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hae03021
]
halTADL_0841
Transcription machinery [BR:
hae03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
halTADL_0841
Prokaryotic type
Archaeal type
TFB
halTADL_0841
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIB
Zn_Ribbon_TF
Trm112p
Sigma70_r4
Zn_ribbon_tTFIIB
YopD
Auto_anti-p27
DZR_2
A2L_zn_ribbon
Motif
Other DBs
NCBI-ProteinID:
ATW87637
LinkDB
All DBs
Position
818626..819684
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AA seq
352 aa
AA seq
DB search
MLGASPAVLLFLAWWDHPGDTMNETSIRSYDRGREQTTEQRADEQTDEQQADEELSCPEC
TGQLITDEEHGETVCVDCGLVVEEDAVDRGPEWRAFDSSQRDSKSRVGAPTTKMMHDKGL
STNIGWQNRDAYGKALSSNQRRQMQRLRTWNERFRTRDSKERNLKQALGEIDRMASALGL
PKAVRETASVIYRRALDENLLPGRSIEGVATASLYAAARQMGNPRSLDEFAAVSRVEKME
MTRTYRYVVRELKLEVKPADPEQYVPRFVSRLELSDEVEREARSLLRGAKEAGITSGKSP
VGLAAAAVYAAALLTNQKVTQSQVGTVADISEVTIRNRYKELLEVDHSELFN
NT seq
1059 nt
NT seq
+upstream
nt +downstream
nt
atgttaggagcctcaccggccgttcttctttttctggcttggtgggatcatccgggggat
acaatgaacgaaacatctatcagaagctacgaccggggtcgtgaacagacaactgaacaa
cgggccgacgagcagactgacgaacagcaggccgacgaggaactcagctgtccggagtgt
accggtcagctcatcaccgacgaggaacacggcgagaccgtctgtgtcgactgtgggctc
gttgtcgaagaggatgccgtcgaccgcgggccggagtggcgcgccttcgacagctcacag
cgggattcgaagtcgcgtgtgggggcaccgacgacaaagatgatgcacgacaaggggctg
tccacgaatatcggctggcagaaccgcgacgcctacggcaaggccctcagctcgaaccag
cgtcgacagatgcagcggctccgcacgtggaacgaacggttccgcacccgtgactcgaaa
gaacggaacctcaagcaggcactcggcgagatcgaccgcatggcgagcgcccttgggctg
ccgaaagcagtccgagagaccgcctcggtgatctaccgccgcgcgctcgacgagaacctc
ctgccgggacgctccatcgaaggtgtggcgaccgcatcgctgtacgctgcagctcgccag
atgggcaacccgcgcagcctcgatgagtttgccgccgtctccagagtcgaaaaaatggag
atgacccggacctaccgctatgtggtccgcgaactcaaactcgaagtcaaacccgccgac
cccgaacagtacgtcccgcggttcgtttcgcggcttgaactcagcgacgaggtcgaacgc
gaggcccgctcgctgctgcggggcgcaaaggaagcagggattaccagcggcaaatcaccg
gtcggacttgccgccgcagctgtctacgccgccgcactgctcaccaaccagaaggtaacc
cagagtcaggtcggcaccgtcgccgacatctccgaagtgacgatccgcaaccggtacaaa
gagctgctggaagtcgaccacagcgaactgttcaactaa
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