Halohasta litchfieldiae: halTADL_0939
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Entry
halTADL_0939 CDS
T05239
Name
(GenBank) transcriptional antiterminator NusG
KO
K15172
transcription elongation factor SPT5
Organism
hae
Halohasta litchfieldiae
Pathway
hae03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
hae00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
halTADL_0939
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hae03021
]
halTADL_0939
03019 Messenger RNA biogenesis [BR:
hae03019
]
halTADL_0939
Transcription machinery [BR:
hae03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
halTADL_0939
RNA polymerase I system
halTADL_0939
Messenger RNA biogenesis [BR:
hae03019
]
Eukaryotic type
mRNA processing factors
3' end processing
DRB sensitivity inducing factor (DSIF) complex
halTADL_0939
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Spt5-NGN
KOW
DUF6093
Glyco_hydro_65C
Motif
Other DBs
NCBI-ProteinID:
ATW87735
UniProt:
A0A1H6T6U7
LinkDB
All DBs
Position
902127..902564
Genome browser
AA seq
145 aa
AA seq
DB search
MGIFAVKTTARQERTVADMIATKEEDEIHAVLSPDSLTSYVMVEADGTAALERLFDEIPH
ARSIVPGKSGIAEVEHFLSPTPDVEGIAEGDIIELIAGPFQGEKARVQRIDEGKDQVTVE
LYEATVPIPVTVRGDQIRVLDSEER
NT seq
438 nt
NT seq
+upstream
nt +downstream
nt
atgggtattttcgccgtcaaaaccacagcgcgacaggaacgaaccgtcgccgacatgatc
gcaaccaaggaggaagacgagattcacgccgttctctcgccggattcgttgaccagctac
gtgatggtcgaggccgacggaacggccgccctcgaacggctcttcgatgagatcccccat
gcccgctcgattgtccccggcaaatccggcatcgcggaggtcgaacacttcctctcgccg
accccggacgtcgagggaatcgccgaaggcgacatcatcgaactcatcgccggtccgttc
caaggcgagaaggctcgcgtccagcggatcgacgaagggaaagatcaggtcacagtcgaa
ctctacgaggcgacagttccgattccggtcaccgtccgtggcgaccagatccgcgtgctg
gacagcgaggagagatag
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