Halohasta litchfieldiae: halTADL_0966
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Entry
halTADL_0966 CDS
T05239
Name
(GenBank) DNA repair exonuclease SbcCD nuclease subunit
KO
K03547
DNA repair protein SbcD/Mre11
Organism
hae
Halohasta litchfieldiae
Brite
KEGG Orthology (KO) [BR:
hae00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hae03400
]
halTADL_0966
DNA repair and recombination proteins [BR:
hae03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
halTADL_0966
Archaeal homologous recombinant proteins
halTADL_0966
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Metallophos
Metallophos_2
Lip_A_acyltrans
Motif
Other DBs
NCBI-ProteinID:
ATW87762
LinkDB
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Position
923416..924657
Genome browser
AA seq
413 aa
AA seq
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MTRVIHTGDTHIGYQQYHSAARRQDFLDAFEAVIDDAIEMDVAAVIHAGDLFHDRRPELP
DLLGTLTALRRLAEADIPFLAVVGNHESTRGGQWLDLFEQMGLATRLGPDPVVVDSVAIY
GLDHVPVSRREDLDYEFTPPSDDTSKSILVSHGLFTPFAHANWETETVLKESNIEFNAVL
LGDNHEAGVEQVDGTWVTYCGSTERASASERDGRGYNVVEFDAEMAGTAGVDIRQRSLST
RPFVFVSVDLAEGEGSSRVREQVRQHELTDAVVSVELLGDGEQVTPASIEEFALDRGALI
ARVTDRREIETETELSVSFADPDAAVDEKVRDLGLSSTALGIDETVRASKIADSNVRKQV
EQLVDGAFDDEPTDDESTADEPADEQPETDTAEDQTDGSDPATDGQLSLEDLQ
NT seq
1242 nt
NT seq
+upstream
nt +downstream
nt
atgacacgggtgatacacaccggcgacacccatatcggctaccaacagtaccattcggcg
gcgcgtcgacaggactttctggacgctttcgaggcggtgatcgacgacgctatcgagatg
gatgtcgcggcggtgatccacgccggggatctgttccacgaccgccgccccgaactcccc
gacttgctgggcacgctcaccgcgctccgccgcttggcagaagccgacatcccgtttctc
gcggtcgtcggcaaccacgagtcgacacgcggcggccagtggttggatctcttcgagcaa
atggggctggcgacccgtctcggtcccgatccagtcgtggtcgactcggttgcgatctat
ggtctcgaccacgtgcccgtctcccggcgtgaggatctggactacgagttcacaccaccg
agcgacgacacgtccaaatcaatcctcgtcagccacggcctctttacgccgtttgcccac
gccaactgggagaccgaaaccgtgctcaaggaatcaaatatcgagttcaacgcggtcctc
ctcggcgacaaccacgaggcaggcgtcgaacaggtcgacgggacgtgggtgacctactgt
gggtcgaccgagcgcgcaagcgcgagcgaacgcgatggacgaggatacaatgtcgtcgag
ttcgacgctgagatggccgggaccgcaggcgtcgacatccgccaacgctcactgtcgaca
cgcccgttcgtcttcgtgagcgtcgacctcgccgaaggggaaggaagcagtcgtgttcgc
gagcaagtccgccaacacgagctcacggatgcggtagttagtgtcgaactactcggggac
ggcgagcaggtcacacccgcaagcatcgaggagttcgccctcgaccgcggcgcgctgatc
gcccgcgtcaccgaccgccgagagatcgaaaccgaaaccgaactctcggtgagtttcgcc
gatccggatgcggcagtcgacgagaaggtccgcgacctcgggctctcgtcgaccgccctt
ggcatcgacgagacagtacgagcgagcaaaatcgccgacagtaacgtccgaaagcaggtc
gaacagctcgttgatggtgcatttgatgatgagccgaccgacgacgagtcgacagcagac
gagccagcagacgagcagcccgagacagataccgccgaagatcagaccgacggctcggat
cctgccaccgacggacagctctccttggaggatctccaatga
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