Halohasta litchfieldiae: halTADL_1076
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Entry
halTADL_1076 CDS
T05239
Name
(GenBank) condensin subunit Smc
KO
K03529
chromosome segregation protein
Organism
hae
Halohasta litchfieldiae
Brite
KEGG Orthology (KO) [BR:
hae00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
hae03036
]
halTADL_1076
Chromosome and associated proteins [BR:
hae03036
]
Prokaryotic type
Chromosome partitioning proteins
Condensin-like complex
halTADL_1076
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SMC_N
SMC_hinge
AAA_23
CCDC39
AAA_21
Rod_CreS
FKBP15
GAS
CEP135_TSGA10_CC
CCDC18_2nd
HmpF
MscS_porin
ATG16
DUF1664
AAA_15
CENP-F_leu_zip
AAA_29
ANGPTL8
LEKR1
APG6_N
DUF745
COG4_N
Exonuc_VII_L
CC_Bre1
DUF724
Fib_alpha
TPR_MLP1_2
Fez1
Baculo_PEP_C
EzrA
AAA_13
CCDC93_CC
SPC25_N
DUF8567
TMF_DNA_bd
CCDC146_CC_N
CLIP1
WEMBL
COG6_N
Motif
Other DBs
NCBI-ProteinID:
ATW87870
UniProt:
A0A1H6SIC4
LinkDB
All DBs
Position
complement(1042034..1045660)
Genome browser
AA seq
1208 aa
AA seq
DB search
MHISALVLDGFKSFGRPTRIPFYEDFTVITGPNGSGKSNIIDGVLFALGLARTRGIRAEK
LTDLIYNPGHDGEEDAGGGTREASVEVILDNSDRTLSREQVVTAAGSDRIGDVDEITIKR
RVKQTEDNYYSYYYLNERSVNLGDIQDLLSQAGIAPEGYNVVMQGDVTEIINMSAFQRRG
IIDEIAGVAEFDQKKEAAFEELEAVKDRINEAALKIEDKENRLEQLADERDTALEYQSHR
EEKSEYEGYLKAAELEDKRESLANTEAKIEECEATLEDRQATLDTKQGRLTRLEDELEDL
NREIERKGEDEQLAIKREIESVKGEIDRLEGRIETAEERVEEAENERRGAFVELDRKQEQ
VEELESEIRDHKVKKASIKGTVQTKQSELEEIEAEIENVDTEFDELKAELAAEKERLEGL
KSDANEAQREKDRLLDDARRRSNEVTEAQNDLEAAREDLPDLKAKLSELHSELDKAEKNA
EKIESTIETLHEERTELKTELDAVDDDLREKQSEYAELEARADDSGDTSWPRAVTTILNA
NKRGVHGAVGDLGSVDGEYATACETAAGGRLANVVVDDDGVGSDCIDFLKSRNAGRATFL
PITKMDDRSLPRLPNDPGVVDFARNLVDYDSKFESIFSYVLGSTLVVEDMQTARQFMGDF
RMVTLDGDLVERSGAMTGGSGGGSRYSFSHSGGGKIERIAKEIAKLEDKRRSLDSEIREL
ESDIDDARDRKSDATETVRSVETDLERTREEIDDTEATTERLEARLEEIEAEREEVTEEM
ESVDDRLDELETEREAVEETISELEADLADSKIPELTAEADEIKSEIDDHKDRMEKIDGR
INEKQLELQYAEEAIEELHDTVETAQNRKAEAKDRIAELEAEIETKEQTLDDKREAVEEL
EAELVDLKAAREDLKATVKAAKAERDEAQEAVAEIESTLQTHRETVDRLEWEIGELESAV
GDYDPEEIPDHDEVESKIETLEAKMEALEPVNMLAIEEYDEVEAELETLTEGRDTLTEER
DGIRDRIDQYESQKKSTFMEAFESINDHFTDIFSRLSAGSGELVLEDPDDPFEGGLTMKA
QPADKPIQRLAAMSGGEKSLTALAFIFAIQRHNPAPFYALDEIDAFLDAVNAERVGEMVD
DLAGDAQFVVVSHRSALLERSERAIGVTMQDDNYSAVTGIQFSEDDAAEGEDGSDDDPDA
IEEATADD
NT seq
3627 nt
NT seq
+upstream
nt +downstream
nt
atgcacatttcagccctcgtcttagacggtttcaaaagcttcggcagaccgacgcgcatc
cccttctacgaggattttacggtcatcaccggccctaacgggtcgggcaaatcgaacatt
atcgatggtgtcctctttgcactcggactcgcccgcactcgcggcatccgcgccgagaag
ctcaccgatctcatttataatcccggccacgacggcgaggaagacgctgggggtggcacc
cgcgaagccagcgtcgaggtcatcctcgacaacagcgaccgtaccctctcccgtgagcag
gtcgtcaccgccgccggaagcgaccgtatcggcgacgtcgacgaaatcacgatcaaacgc
cgggtcaaacagaccgaagataactactattcgtactactatctcaacgaacgctcggtg
aatctcggggatattcaggacttgctgtcgcaggccggaatcgcccccgaggggtacaac
gtcgtgatgcagggcgacgtcaccgagatcatcaacatgtcagcgttccagcgccgcggc
atcatcgacgaaatcgctggcgtcgcggagtttgaccagaagaaggaggccgctttcgag
gagttggaagcggtcaaagaccgaatcaacgaggccgctctcaagatcgaagacaaggaa
aaccggctcgaacagctcgccgacgaacgggatacggcgctcgaataccagtcccaccgc
gaggaaaaatccgagtatgaggggtatctgaaggccgccgaactcgaagacaaacgcgag
agcctcgccaacaccgaggccaagatcgaagagtgtgaagccacgctcgaagaccgacag
gcgacgctcgataccaaacagggtcgactcacccgactcgaagacgaacttgaagacctg
aaccgcgagatcgaacgcaagggcgaggacgaacagcttgcgatcaaacgcgagatcgag
tcggtcaaaggcgagatcgatagactcgaaggccggatcgaaaccgccgaggagcgcgtc
gaggaggccgaaaacgagcgccgcggtgcgttcgtcgaactcgatcgcaagcaggaacag
gttgaggaactcgaaagcgagatccgcgatcacaaggtcaagaaagcctcgatcaagggg
accgtccagaccaagcagtccgaactcgaagagatcgaagccgagatcgagaacgtcgac
accgagttcgacgaactgaaagccgaactcgctgcggaaaaagaacggcttgaagggctc
aaatcggatgccaacgaggcccagcgcgagaaggaccgcctgttggacgacgcgaggcgg
cgatccaacgaggtcactgaagcccagaacgatctcgaagccgcccgtgaggatctcccc
gacctgaaggcgaaactctcggaactccacagcgaactcgacaaagccgagaagaacgcc
gagaaaatcgagtcgaccatcgagacgctccacgaggagcgaaccgaactcaaaacggaa
ctcgacgcggtcgacgacgacctccgcgagaaacagtcggagtacgccgaactcgaagcc
cgcgccgacgacagcggcgacacctcgtggccccgcgccgtgacgacgattctcaacgcc
aacaagcgcggtgttcacggtgcagtcggcgatctggggagcgtcgacggcgagtatgcg
actgcctgtgagaccgccgccggtggccgactcgcaaacgtcgtggtcgacgacgacggc
gtcggctcggactgcattgatttcctgaaatcccggaacgcaggccgggcgacgttcctc
ccgatcacgaagatggacgaccggagcttgccgcggttgccgaacgatccgggcgtcgtc
gacttcgcccgcaatctggtcgactacgactcgaaattcgagtcgatcttttcgtacgtc
ttggggtcgacgctcgtcgtcgaggatatgcagaccgcccgccagttcatgggcgatttc
cggatggtaaccctcgacggcgatctggtcgaacgctcgggggcgatgaccggtggctcc
ggcggcggctcacggtactccttttcgcactccggcggtgggaaaatcgaacggatcgcc
aaggagatcgccaaactggaggacaaacgccgcagcctcgattcggagatccgggagttg
gaaagcgatatcgacgatgcccgggaccgcaaatccgacgccaccgaaacggtgcgctcg
gtcgaaactgatctcgaacgcacgcgtgaggagatcgacgacaccgaagccacaaccgag
cggctcgaagctcgcctagaggagatcgaagccgaacgcgaggaggtcaccgaggagatg
gagagcgtcgacgaccggctcgacgaactcgaaaccgaacgcgaggccgtcgaggagacc
atttccgaactggaagccgacctcgcggattcgaagatccccgaactcaccgctgaggcc
gacgagatcaaatcggagatcgacgaccacaaagaccgaatggagaagatcgacggccgg
atcaacgaaaaacaactcgaactccagtacgccgaggaggccatcgaggagctccacgac
acggtcgaaacggcccaaaaccggaaggcagaggccaaagaccggatcgcggagctggag
gccgaaatcgaaaccaaagaacagacgctcgacgacaaacgcgaggccgtcgaggaactc
gaagccgaactcgtcgacctcaaagccgcccgtgaggatctcaaagccaccgtcaaggcc
gccaaagccgagcgtgacgaggcccaagaggccgtcgccgagatcgaatccacactccag
actcaccgcgagacggtcgaccggctcgaatgggagatcggcgaactcgaatcggcagtc
ggcgactacgaccccgaggagatacccgaccacgacgaggtcgaatcgaaaatcgagaca
ctggaagcgaagatggaggcactcgaaccggtcaacatgctggccatcgaggagtacgac
gaggtcgaagccgaactggagacgctcacggagggtagggacaccctaacggaagaacga
gacgggattcgtgaccgcatcgatcagtacgaatcccagaagaagtcgacgttcatggag
gccttcgagtcgatcaacgatcacttcacggatatcttctcacggctctcggcggggagc
ggcgaactcgtgcttgaagatcccgacgacccattcgagggtggattgacgatgaaagcc
cagccagccgacaaaccgatccagcgactggcggcgatgtcaggcggcgagaaatcgctg
accgcactggcgttcattttcgctatccagcgacacaaccccgcgccgttctacgcgctc
gacgagatcgatgccttcctcgatgccgtgaatgccgaacgcgtcggcgagatggtcgac
gatctggctggcgatgcccagttcgttgtcgtctctcaccgctcggcgctccttgaacgc
tccgagcgagcgattggcgtcacgatgcaggacgacaactacagcgccgtgaccgggatt
cagttcagcgaggacgacgctgcggagggtgaggatggctcggatgacgaccccgacgca
atcgaggaggccacagccgatgactga
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integrated database retrieval system
