Halohasta litchfieldiae: halTADL_1107
Help
Entry
halTADL_1107 CDS
T05239
Name
(GenBank) tRNA pseudouridine13 synthase
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
hae
Halohasta litchfieldiae
Brite
KEGG Orthology (KO) [BR:
hae00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
hae03016
]
halTADL_1107
Enzymes [BR:
hae01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
halTADL_1107
Transfer RNA biogenesis [BR:
hae03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
halTADL_1107
Prokaryotic type
halTADL_1107
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruD
Motif
Other DBs
NCBI-ProteinID:
ATW87900
UniProt:
A0A1H6S7A1
LinkDB
All DBs
Position
1077484..1078854
Genome browser
AA seq
456 aa
AA seq
DB search
MRESHPIEQAVGIDYYVSDADGIGGQLRTEPDDFQVTEIENFDPEPVDADPGAYPEILLR
ATLRKWDTNDFAGRISDAMGISRERVAWAGTKDKHAVTTQLFSIRDVDPEAVDALDVNGA
EIEVLGRTGRSISFGDLHGNRFVIRVRDADSDAPERTKETTAALREFVDSLDSGGTEGTA
GVPNWFGQQRFGSQRPVTHEVGLNIVRREWREAVLSYVANPFETEREGTQSARQFVADEA
ASDDPDWQACLDQIPGYLGYERSMLHRLIEDGAETPADFRNALEAVPWNLQRLFVNAAQS
YLFNQILSERLRRGIPFDRPVEGDVCCFVDREAPDGLYAPDTDRLQNVSGKRVDVMERHC
SRGRAFVTAPLIGTETELAEGEPGEIEREILDELDLDPADFDLPGSFESTGTRRAILVRT
DLDVDPDELTFEFALPSGSYATALMREYLKRGPLDL
NT seq
1371 nt
NT seq
+upstream
nt +downstream
nt
gtgcgtgagtcccaccccatcgaacaggcagtcggcattgactactacgtgagcgacgcc
gacggcatcggtggccaacttcgcaccgagcccgatgactttcaggtcacagaaatcgag
aatttcgatcccgaaccagtcgacgccgatcccggtgcgtaccccgaaatcctcctgcga
gccacgcttcgaaagtgggacaccaacgatttcgcgggccggatctccgatgcgatgggg
atcagccgcgagcgcgtcgcgtgggccgggaccaaggacaaacacgccgtcaccacacag
ctgttttcgattcgggacgtcgaccccgaagctgtcgacgcgctggatgtcaatggcgcg
gagatcgaagtcttgggccgaaccgggcgctcgatctcgtttggcgatctccacggcaac
cgattcgtgatccgggtccgcgatgccgactccgatgcccccgaacgaaccaaagaaacg
accgccgcgctccgggagttcgtcgacagtctcgatagtggcggcaccgaagggaccgct
ggcgtcccgaactggttcggtcaacagcggttcggcagtcagcgaccagttacccacgaa
gtcggactcaacatcgtccgccgcgagtggcgcgaggccgtgctgtcgtacgtcgccaac
ccctttgagaccgaacgcgaagggacacagagcgctcggcagttcgtcgcggacgaggcc
gcttccgatgatcctgactggcaggcctgcctcgaccaaattccgggctatctcggctac
gagcgatccatgctccatcgcctgatcgaagacggagccgaaacgcccgcggacttccgc
aacgcactcgaagccgtcccctggaacctccagcgactgttcgtcaatgcggcccagtcg
tatctcttcaaccaaatcctctcggagcgactccgtcgggggattccgtttgaccgacca
gtcgagggcgacgtctgttgtttcgtcgaccgcgaagctcccgatggactctatgccccc
gacaccgaccgactgcagaacgtctcgggcaagcgcgtcgacgtgatggaacgacactgt
tcgcgcgggcgggccttcgttacggcccccctaatcggcactgagacggagttagccgag
ggtgaacccggcgagatcgaacgcgagattctcgacgagttggatctcgatccggctgac
tttgatttaccggggagtttcgagtcgaccgggacgcggcgggcaatcttggttcggacc
gatctggacgtcgaccctgacgaactgaccttcgagttcgcgctgccgagcgggtcgtat
gcgaccgccctcatgcgggagtatttaaaacgcgggccgctggacctgtag
DBGET
integrated database retrieval system
