Halohasta litchfieldiae: halTADL_1142
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Entry
halTADL_1142 CDS
T05239
Name
(GenBank) DNA mismatch repair protein MutS
KO
K03555
DNA mismatch repair protein MutS
Organism
hae
Halohasta litchfieldiae
Pathway
hae03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
hae00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
halTADL_1142
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hae03400
]
halTADL_1142
DNA repair and recombination proteins [BR:
hae03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
halTADL_1142
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_I
MutS_IV
MutS_II
nSTAND_NTPase5
AAA_14
AAA_29
Motif
Other DBs
NCBI-ProteinID:
ATW87935
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Position
1106197..1109040
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AA seq
947 aa
AA seq
DB search
MSLGDSLPLMTTVTGPPSTMADKQDELTPMLSQYLELCEAHTDALVLFQVGDFYEAFCEA
AEEVARICEVTLTQREDSTGTYPMAGIPIDNASSYLKRLVDADYRIAIADQVEDAADATG
LVDRAVTRVITPGTVVEDELLAAGTTNYVASVVRDENEFGVAAVDVSTGECSVTSVPTTA
DVSEELDRISPAELLVGPEMPSITPANATAGWLESEVDPACFERAAAVDCLAGYLSDPVG
RVENDAELRACGAVLAYAEYTQGDDGTLEYVSRIRRYDPRGQLRLDAAALRSLELFENRG
PGAGDTLFGVIDETASALGRRCLTRWLRRPLVDRDKIEARLDAVEALTDASVARTELHDL
LKEAYDLERLVGRISRGRAHARDLRSLQSTLSVVPELKEALSEFDALADYRERLDELAEL
AELIDDAIVADPPTELTEGGVIRPEFDDDLNALRTTETEGRQWVADLEATERERTGIDSL
SVGHNQVHGYYIEVTNPNLDKVPDDYTRRQTLKNAERFYTPELKEREDEIFGAAERADSL
EYDLFCSVRQQVAAETERIQALATAIAELDAICSLAITANQGEYIRPTFHSESEESTDAT
NTGIDIEGGRHPVVETTQESFVPNDADLSGGEVAIITGPNMSGKSTYMRQVALTCVLAQI
GSFVPAEAAELPVLDRIFTRVGASDDIAGGQSTFMREMTELTEILHDGTDNTLVLLDEVG
RGTSTADGLAIARATTEFIHDELGALTLFATHYHGLTGLADEREGVFNLHFAATREDNEI
TFLHRIAPGASSASYGIEVARMAGVPETVVDRARSIVDGTEGQNRPTGEPTVLPNSKPTD
TSNTQSETSRDTADDRNSDQTSAVDDDRVSYPEEEFETESTNDDAADDRSSYPEEDFFGG
TPDPAVDAPLDEESMVRVAVALRSLDVASMTPLEALNTLDELRSELE
NT seq
2844 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcttggggactccctaccgctaatgacaaccgtgaccgggcccccatcaacgatg
gccgacaagcaggatgagctgacgccgatgttgagccagtatttggagctgtgtgaggct
cacaccgatgccctcgtgctgtttcaggtcggtgacttctacgaagctttctgtgaggcc
gccgaggaggttgcccgtatctgtgaggtaacgctgacccagcgtgaggattcgaccggc
acctatccgatggctgggattccaatcgacaacgcgagttcctatctcaagcgactggta
gacgccgactaccggatcgccatcgccgatcaggtcgaggatgccgccgacgcgaccggg
ctggtcgaccgggctgttacccgcgttatcaccccgggcactgtcgtcgaagacgaactg
ctggcagccggcaccacgaactacgtcgcaagcgtcgtccgcgacgaaaacgagttcggg
gttgccgcggtcgacgtctcgaccggcgaatgttccgtgacgagcgtccccaccaccgcc
gacgtcagcgaggaactcgaccgtatctcgcccgccgaactcctggtcggccccgagatg
ccgtcgatcacaccggcgaacgcgaccgcgggctggctcgaaagcgaggtcgaccccgcg
tgcttcgagcgtgcggccgccgtcgactgtctggctggctacctttcggatcccgtgggg
cgcgtcgaaaacgacgctgaactccgggcctgtggcgcagtgttggcctacgccgagtac
acgcaaggtgacgatggcaccctcgaatacgtctcccggatccgccgctacgatccacgg
ggccaactccgcctcgatgccgcggccctccgcagcctcgaactgttcgagaaccgtggg
ccgggtgctggcgacacgctgttcggcgtcatcgacgagacggcctccgcgctcggtcga
cgctgtctcacacggtggctccgccgcccgctggtcgaccgagataaaatcgaggcccga
ctcgatgccgtcgaagcactcaccgacgcgtcggtggcccgaacggagcttcacgacctc
ttaaaagaggcctacgacctcgaacggctcgtcggacgcatctcacgcggacgagcgcat
gcgcgggacctccggtcgctacagtcgacgctgtcggttgtcccggagctgaaggaggcc
ctctcggagttcgacgcgctcgccgactatcgcgagcgactcgatgaactggcagagctt
gccgaactcatagacgacgctatcgtggctgacccaccgacagaactcacagagggcggc
gtgattcgtcccgagttcgacgacgacctcaacgcgcttcggacgaccgaaacagagggt
cgacagtgggtcgccgacttagaggcgaccgagcgggagcgaaccggtatcgactcgctg
tcggtcggccacaatcaggtccatggctactacatcgaggtgacgaacccgaacctcgac
aaggtgcccgacgactacacgcgtcgacagacactcaaaaatgccgaacggttctacaca
cctgaactcaaggagcgagaagacgagatcttcggagccgcagagcgcgctgacagtctc
gaatacgacctgttttgttcggtccgacagcaggtagccgccgaaaccgagcggattcag
gcactggcaaccgccatcgctgaactcgatgcgatctgctcgcttgcaatcaccgccaac
caaggcgagtacatccgacccacgttccattcggagtccgaggagtcgaccgatgcaaca
aataccggaatcgacatcgagggcggtcgacatccggtcgtcgaaaccacccaggagtcc
ttcgtgccgaacgatgcggacctctcaggcggcgaggtagcgatcatcaccggcccgaac
atgagcgggaagtcgacctacatgcggcaggtcgcactgacctgcgtgctggcccagatc
gggagcttcgttccggcggaggccgccgagctcccggttctcgaccgcatctttacgcga
gtcggtgccagcgacgacatcgccggcggccagtcgacgtttatgcgtgagatgaccgaa
ctcaccgaaatcctccacgatggaaccgacaacaccctcgtgttgctcgacgaagtcggg
cggggcacgagcaccgccgacgggctggcgattgcccgcgccaccaccgagttcatccac
gacgaactgggcgcactaacgctgtttgcgacccactaccacgggttgacggggctcgcc
gacgaacgcgagggcgtgttcaacctgcatttcgcggccacccgcgaggacaacgagata
acgttcctccaccggatcgcaccgggggcctcctcggcgtcctacgggatcgaggtcgcc
cggatggccggggttcccgagacggtcgtcgaccgcgcgcggtcgattgtcgatgggacc
gaaggccagaacagaccaaccggtgagccgacggtgctacccaactccaagccgacagac
accagcaacacacagtcggagacgagccgtgacacagcagacgaccgaaacagtgaccag
accagtgcggtcgacgacgaccgcgtctcctaccccgaagaagagttcgaaaccgagtcg
accaacgacgacgccgccgacgaccgttcctcctatcccgaagaggatttctttggtgga
acgccggaccccgcggtcgacgcaccgctcgacgaggagtcgatggtccgcgtcgccgtc
gcgctccgatcactcgatgttgcgagcatgacaccgctggaagcactcaacacgctggac
gaactgcggtcggaactagagtag
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