Halohasta litchfieldiae: halTADL_1197
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Entry
halTADL_1197 CDS
T05239
Name
(GenBank) PAS domain S-box-containing protein
KO
K06930
HTH-type transcriptional regulator, bacterioopsin transcriptional activator and related proteins
Organism
hae
Halohasta litchfieldiae
Brite
KEGG Orthology (KO) [BR:
hae00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
hae03000
]
halTADL_1197
Transcription factors [BR:
hae03000
]
Prokaryotic type
Helix-turn-helix
Other families
halTADL_1197
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BAT
GAF_2
HTH_10
GAF
PAS
PAS_4
PAS_9
HTH_20
PAS_7
PAS_8
PAS_GdpP
PAS_10
Motif
Other DBs
NCBI-ProteinID:
ATW87989
UniProt:
A0A1H6WQH0
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Position
complement(1157607..1159511)
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AA seq
634 aa
AA seq
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MKYSEPAPTTVLATVNRLGPPGTPMSTTEVAAEFDCPLEAVDDRLRTLVKDDFLDRKIVG
NQQVWWRPPRDTQQSHSTPTSNDVDADSASQPLSMAELNPVLEVLDTVGVGIFILDSTFE
VVWFNTAIEQYFGLDRQAIIGRNKRNVIREEIRGTVANPDRFAETVLTTYNDNTFSEQFE
CRITASDGRGERWLEHRSAPIKSGVYEEGRIELYDDITDRKRHEQALRHQHEQLAELNSI
NKVIQNITTAVIEQSTRGEIETIVCDRLTDVDNYEFAWIGEVDTQSQAIRPRAEGGVEGY
LEDVSLSANPNNPGGHGPAGTAIRTQEMQVTQDVLSNPEFEPWHEYAEHYGYRSVAVVPI
VYAGSCYGLLGIYAANPHAFDNEVCPVVAQLGEIMGHAIAATERKQALMSPEITEIQFLV
PDLLSDMSIDSDHDGTITLDRVVPLGDDVFLEYGTVDTDVVETLEAIVGKHPHLELVTLS
EQDDETLSFVIKLLEPPITSVIATYGGYLQQMNIKDGSLQMTIHLPTTVPARRIIDRIQQ
QYPTVELLSRRQRSRSTESPERVELTSDLTDRQRAVIETSVRSGYFEWPRNVSGEELATL
FGVTPPTFHQHLRLGQKKIFESLFLLPPFDGDGR
NT seq
1905 nt
NT seq
+upstream
nt +downstream
nt
atgaaatattccgagcctgccccgacgactgtgcttgcgacagtcaataggcttggccca
cctggcacaccgatgtcgaccacagaggttgctgctgagttcgactgcccactagaggct
gtcgacgacagactgagaacacttgtcaaggatgatttcctagaccggaaaattgttggg
aatcaacaagtatggtggcgaccacctcgtgacacgcagcagtcacacagcacacccaca
tccaacgatgtcgacgctgacagtgcgtctcaaccactgtcaatggccgaactgaatccg
gtgttggaagttctggatacggtcggtgtcggtatcttcatcttggattccacgttcgag
gttgtgtggttcaacacagccattgagcagtacttcggtcttgaccgccaggcaatcatt
ggacgcaacaaacggaacgttatccgcgaggagattcgagggactgttgccaatccggat
cggtttgcggagactgtcttgactacctacaacgataatacgttttccgagcaatttgaa
tgtcgaatcaccgcatctgatggacgtggggaacgttggctggagcaccgcagtgcccca
atcaagtcgggtgtgtatgaagagggtcggatcgaactctacgacgacatcactgaccgc
aagcgacacgaacaggcactccgccatcagcacgaacagcttgctgaattaaatagtatc
aacaaggtaattcagaacataaccaccgcggtgatcgagcagtcgactcgcggagagatc
gagacaatcgtctgtgatcgtctcaccgatgtagataactacgagttcgcctggatcggc
gaggtcgacacccaatcccaggcgatacgcccccgagccgaaggcggggttgagggctat
ctcgaagacgtctcactctcggcaaacccgaacaaccccggcgggcatggtcctgccgga
actgccattcggacccaagagatgcaagtcacacaggacgtgctgtccaatccggagttc
gaaccgtggcacgagtacgccgagcactacggctatcggtcggtggctgtggtcccgatt
gtctacgccggcagttgctatggactgcttggaatctatgctgcgaacccacacgccttc
gacaatgaggtgtgtccagtggttgcacaacttggcgagattatgggccacgcgattgct
gcaactgagcgcaagcaggcactcatgagtcccgagattacagaaatccaatttctggtg
cccgatctcctcagcgacatgagtatcgattcagatcacgacggcacgatcacgctcgac
cgagtggtccctctcggtgacgatgtgtttctcgaatacgggactgtcgatacagacgta
gtcgagactctagaagcaatagttggcaagcatccacatctggaactggtgacgctcagt
gagcaggacgatgaaaccttatcgtttgtaatcaagcttttggagccaccaatcacctcg
gttattgcgacctacggcggctatctacagcagatgaatatcaaggatggatcacttcag
atgacgatccaccttccgaccaccgtccccgcccgtcgaatcattgatcgaatccaacag
caatacccgactgtcgaactcctctcacgtcgacaacgatcacggagtacagagtccccc
gaacgggtcgaactcacgagcgacttgactgaccggcaacgggctgtaattgagacgtcg
gtccgctcgggctattttgagtggcctcgtaatgtatctggtgaggagttggcaacactg
ttcggcgtaacaccgccgacattccatcagcacctccgcttgggccaaaagaaaatattt
gaatcactgttcctgttgccaccattcgacggagacggcaggtag
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