Halohasta litchfieldiae: halTADL_1405
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Entry
halTADL_1405 CDS
T05239
Name
(GenBank) PAS domain S-box-containing protein
KO
K06930
HTH-type transcriptional regulator, bacterioopsin transcriptional activator and related proteins
Organism
hae
Halohasta litchfieldiae
Brite
KEGG Orthology (KO) [BR:
hae00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
hae03000
]
halTADL_1405
Transcription factors [BR:
hae03000
]
Prokaryotic type
Helix-turn-helix
Other families
halTADL_1405
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BAT
Response_reg
HTH_10
GAF_2
GAF
PAS_8
GAF_3
PAS_3
PAS_9
PAS
HTH_20
DUF4432
Motif
Other DBs
NCBI-ProteinID:
ATW88180
UniProt:
A0A1H6W218
LinkDB
All DBs
Position
complement(1359812..1361797)
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AA seq
661 aa
AA seq
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MVGENAVPHHLDDGNTPVSVLLVDDNEQWARFVASDLEAEYPSITVHLALSPNEAMLQLG
EFDIDCVVADYQMPEVDGLELLERLRRERPELPYILATSEGSEDIASAAIDAGVSDYVVK
DPRVDQLSVFASKIHRAVEAARLRQAMAESERRYRSLTEQSSDAILIIQDDELVFYNQRL
IDLTGRPRSWFESVEDLIATVHPDDRDEVRATLRRWQDMSAGGQLDELRLQTVDGAVQHC
EYTGRQISHDGETAIMLSIRDVTDRKQRQRELRWERDLNRAVQNVLVAARIRDDIEQGVT
GLLVDHGYELAWIGVPEHGTLTPRAQHGATAYLTAIDLSMETGTADSEPSLWAARADESR
FVDDFEELFPTDWLEQAVASGCRSGAALPLSYNEISYGVLAVYHAEPGRFDETERRLLGE
LADSIAFAIHTVDTEQALASDHTVELTLRVVDDAYYLLDVVRQQRLTDGESITVHGTLRH
TDGQFLQYLSVDESMVGTLRTALDSHPDVSEVTTIVEGTVSRLQVVVEAATPESILINQG
AVVRSTTVETSGAELVVELPARSSVRETVDNVAMVFDGTAVLSVGDTTRSVADSASVSIV
DMSGLTAKQTAALEAAFHHGYFEQPRRSSATEIAEALGVAHSTFLQHLRAGQQKLFADLY
R
NT seq
1986 nt
NT seq
+upstream
nt +downstream
nt
atggtcggtgaaaacgctgttcctcaccatctggatgatggaaacacgcccgtctcggtc
ctgctcgtcgacgacaacgagcagtgggcacgattcgtggctagtgatctcgaagccgag
tatccatctatcaccgtccatcttgcactgagtcccaacgaggcgatgttgcagctcgga
gagttcgacatcgactgtgtcgtagccgactaccagatgccggaggtcgacggcctcgaa
ctcttagagcggcttcgtcgagaacggccggagctaccctatattctcgccacaagcgag
ggcagcgaggatatcgcctcggcagcgatcgatgcgggcgtctcggactacgttgtcaag
gacccgcgagtcgaccaactctcggtatttgccagcaaaatccaccgggcggtcgaggct
gcccgcctccggcaggcgatggccgaaagcgagcgtcgctaccggtcgctgaccgaacag
agcagcgacgcgattctcatcatacaggacgacgaactcgtcttctacaaccagcggctt
atcgatctcactggtcggccccgttcgtggttcgaatcggtagaggaccttattgcgacc
gttcaccccgacgaccgcgatgaggttcgagccacccttcgtcgctggcaggatatgtcg
gctggcggccaactcgacgaactccggcttcagactgtcgacggggcagttcagcactgt
gagtacactggtcgacagatcagtcacgacggcgagacggccataatgctctcgatccgt
gatgtaaccgaccgcaagcaacgccagcgcgagctcaggtgggaacgcgatctcaatcgg
gcggtgcaaaacgtcctcgtcgcggcccggattcgagacgacatcgagcagggggtaacc
ggcctccttgtcgaccacgggtacgaactggcatggattggcgttccggaacacggcacg
ctcacaccgcgcgcacaacacggcgcgacggcgtatctcacggctattgatctctcgatg
gaaactggcaccgccgacagcgagccgagcctctgggctgctcgcgctgacgagtcgcgg
ttcgtggacgatttcgaggagctgttcccaaccgactggctcgaacaggcagtcgcatcc
ggctgccgatcgggtgcagcactcccactttcatacaacgagatctcctacggtgtgctt
gcagtctatcacgccgagcccggtcggtttgacgagactgaacgtcgactcctcggtgag
ttggccgacagtatcgccttcgcgatccacacagtcgataccgaacaggcactggcatcc
gaccacaccgtcgagttgacgctccgcgtggtcgacgacgcgtactatctgctcgatgta
gttcgacaacagcggcttactgacggcgaatcgatcactgtccatggaacccttcgacac
accgacggacagtttctacagtatctttcggtcgacgagtcgatggttgggacactccga
accgcactcgattcgcaccccgatgtcagtgaggtgacgacaatcgttgagggaactgtg
tctcgcctccaagtcgttgttgaggccgccacgccggagtctatcctgatcaatcagggt
gcagtcgtccggtcgaccaccgtcgaaaccagtggggccgaactggtcgttgaacttccg
gcgcggagctcagtccgggagacggtcgacaacgtggcaatggtgttcgatggaactgcc
gtcctatcggtgggcgacaccacacgctccgttgctgactccgcttcggtgagtatcgtc
gacatgagtgggcttactgccaagcagaccgccgccctagaggcggcgttccaccacggc
tactttgagcagccacgcagaagctcggccaccgagatcgccgaggctctcggtgtcgcc
cattcgacgtttctccagcatctccgagcgggccagcagaagctgtttgccgacctctac
cgctaa
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