Halohasta litchfieldiae: halTADL_1746
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Entry
halTADL_1746 CDS
T05239
Name
(GenBank) transcription initiation factor TFIIB
KO
K03124
transcription initiation factor TFIIB
Organism
hae
Halohasta litchfieldiae
Pathway
hae03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
hae00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
halTADL_1746
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hae03021
]
halTADL_1746
Transcription machinery [BR:
hae03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
halTADL_1746
Prokaryotic type
Archaeal type
TFB
halTADL_1746
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIB
Zn_Ribbon_TF
ORC6_2nd
RB_B
Zn_ribbon_3
Cas12f1-like_TNB
DZR_2
DZR
Cluap1
Zn_ribbon_RPB9
Motif
Other DBs
NCBI-ProteinID:
ATW88500
UniProt:
A0A1H6R195
LinkDB
All DBs
Position
1676379..1677239
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AA seq
286 aa
AA seq
DB search
MPSTSARCPDCGSAIYTDSDEQLCEDCGLVVETDRLDRGPEWRSFADDETNPKRTGSPLT
VARHDRGLSTEIGYSSDLTAAKRRQFVRLRRQHNRARMGDKRTRNQVHAFTRIKHIVSNK
SLPTQVRDHACSLFRSAQNEDLLRGRSIEGFVAACLYAACRLESISRTIDEITEASHSSR
EEFQAAYDALNRDLGLPVEPTHPREYLPRYADRLDLSSGIERRARELVDRTEKEGILNGR
NPSGVAAACLYAAAKENDADLTQSEAASVASVTPVTLRTTYQELGS
NT seq
861 nt
NT seq
+upstream
nt +downstream
nt
atgccctccacgagtgcccgttgccccgattgtggcagtgctatctataccgattcggac
gaacagctgtgtgaagactgcggactcgtcgtcgagaccgaccgcctcgaccgaggtccc
gagtggcggtcgtttgccgacgacgagaccaaccccaagcgaaccggctcgccactcacc
gtcgccagacacgaccgcggcctgtcgaccgagatcggctacagctcggatctcaccgcg
gcgaaacgccgccagtttgtccggctccgccgccaacacaaccgcgcccggatgggcgac
aagcgaacccggaatcaggtccacgccttcacccgaatcaaacatatcgtcagcaacaaa
tccctccccacgcaggtccgagatcacgcctgttcgctgtttcgctcggcccaaaacgag
gacctgctccgcgggcgatctatcgaagggttcgtcgcggcctgtctgtatgcggcctgt
cgactggagtcgatttcccggacaatcgacgagataaccgaagcctctcacagtagtcgc
gaggagtttcaggccgcctacgacgcgctcaaccgggatctcggtctcccggtcgaaccg
acccatccccgagaatacctccctcggtatgccgaccgacttgacctgtcgagcgggatc
gaacgccgcgcgcgggaactggtcgaccgaaccgaaaaagaggggattctcaacggccgg
aacccgagtggggttgccgcagcctgtctgtatgcagcggcaaaagaaaacgacgccgac
ctcacacagagcgaggcggcatcggttgcatccgtgacaccggttacgcttcggacgacc
tatcaggaactcggttcctga
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