Halohasta litchfieldiae: halTADL_1881
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Entry
halTADL_1881 CDS
T05239
Name
(GenBank) DNA excision repair protein ERCC-2
KO
K10844
DNA excision repair protein ERCC-2 [EC:
5.6.2.3
]
Organism
hae
Halohasta litchfieldiae
Pathway
hae03022
Basal transcription factors
hae03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
hae00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
halTADL_1881
09124 Replication and repair
03420 Nucleotide excision repair
halTADL_1881
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hae03021
]
halTADL_1881
03036 Chromosome and associated proteins [BR:
hae03036
]
halTADL_1881
03400 DNA repair and recombination proteins [BR:
hae03400
]
halTADL_1881
Enzymes [BR:
hae01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
halTADL_1881
Transcription machinery [BR:
hae03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
halTADL_1881
Chromosome and associated proteins [BR:
hae03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
halTADL_1881
DNA repair and recombination proteins [BR:
hae03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
halTADL_1881
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Helicase_C_2
DEAD_2
DEAD
ResIII
ATPase
SLFN-g3_helicase
nSTAND3
Zot
AAA_30
AAA_25
AAA_22
AAA_16
AAA_34
AAA_11
GvpD_P-loop
AAA_19
DAP3
Motif
Other DBs
NCBI-ProteinID:
ATW88634
UniProt:
A0A1H6QVS9
LinkDB
All DBs
Position
1810818..1813001
Genome browser
AA seq
727 aa
AA seq
DB search
MAVDDALRFFPYETPYPNQREAIDRIANSLGQRRDVLLEGAPGTGKTLSALVPALAYARE
HDKTVVITTNVHQQMRQFVEDARAITRTEPIRAVVFKGKKQMCHIDVGYQECQSLRDTTR
ELVDTETDKDQLAARQQELLDASKEGDSGAAEARSAVMDELDSVEDELEELREGNVCDFY
YNNLIDDNDEFFSWLFNDVRTPDDVYEYADQQGLCGYELLKEGMEGVDLVVCNYHHLLDP
MIREQFFRWLDRDPDDVITVFDEAHNIVDAARDHATRTVTENTLASALDELDGLDDSRAE
PARNVIEAFLEALQSTYDTGLGTKINPRKVGDEWTDLAVANRDRRDDLTLAFLQRYEGRG
ISIEAELAVQLGKVLDEEYEQAYRDGDATTRAECQTLQAATFISTWMSEGDELGQHPMVG
VRRDGATEEIYGRAELYTCIPREVTSELFDEVYASILMSATLRPFDVTEDVLGLDSPARL
AYKLNYPEANRRTYAAKVPALFASERDNPETQEIVTELLEDVIRFTPGNTLLFFPSYSES
ERYYDRLDDSNAGELGTLVLDGSDRSTEKLRTRFVDSDNATLCTSLWGTLAEGVSFDGDD
ARTVVVVGVPYPHLSERMDAVQDAYNRAYSDSRRTRDAGWAYAVEIPTIRKTRQALGRVI
RSPEDFGVRILADKRYTQADMGKYSVRGSFPVEEREEFVDIKPQKLKFAMLNFYTDHDAY
GGDPPEP
NT seq
2184 nt
NT seq
+upstream
nt +downstream
nt
gtggcagtagacgacgcgctacggttctttccgtacgagacgccgtatccgaaccagcga
gaggccatcgaccggatcgccaactcgctgggccagcgtcgagacgtcctcttagagggc
gctcccggcactggcaagacgctgtcggcactcgtgcccgcgctcgcatacgctcgcgaa
cacgacaaaacggtcgtcatcacgaccaacgtccaccagcagatgcggcagttcgtcgaa
gacgcccgcgcgatcactcgcaccgagccgattcgcgcagtcgtttttaaaggcaaaaag
cagatgtgccatatcgacgtggggtatcaggagtgtcagagcctccgggataccacccgt
gagttggtcgacaccgagaccgacaaggaccaattggccgcccgccaacaggagctgttg
gatgcaagcaaggagggcgattcgggcgcggccgaggcccgcagcgcggtgatggacgaa
ctcgattcggtcgaagacgaactcgaagagctacgggagggaaacgtctgtgatttttat
tacaacaatctcatcgacgacaacgacgagttcttttcgtggctgttcaatgacgtgcgg
acccctgacgacgtctacgagtacgccgaccagcagggactctgtggctacgagctttta
aaagagggaatggagggtgtcgacctcgtggtctgcaactaccatcacctgctggacccg
atgatccgcgagcagtttttccggtggttggaccgcgatcccgacgacgtgatcacggtg
ttcgacgaggcccacaacatcgtagacgctgccagagatcacgcgacgcgaacggtgacc
gagaacacgctggcgtcggcgctcgacgaactggacggtctcgacgactcccgggcagag
cctgcccgcaacgtgatcgaggcgttcctagaggccctgcagtcgacctacgacacagga
ctggggacgaaaatcaacccgcgaaaggtcggtgacgagtggacagatctcgcggtggcg
aaccgcgaccggcgagacgatctgacgctggcgttcctgcagcgctacgagggccgcggg
atcagtatcgaggccgaactcgccgtccagttgggaaaggtcctcgacgaggagtacgaa
caagcctatcgggatggtgatgcgacgacgcgggccgaatgccagacgctccaagcggcg
acctttatcagtacgtggatgtccgagggcgacgaactcggccagcatccgatggttggc
gtccggcgggatggggccaccgaggagatctacggccgggcggagctgtatacctgtatt
ccgcgcgaggtgacaagcgaactgttcgacgaggtgtatgcgagcattctgatgagcgcg
acactccgaccgttcgatgtgaccgaagacgtcctcggcctcgactcaccggcgcggctg
gcctacaaactaaactatcccgaagccaaccgccggacctacgctgcgaaggtgccggcg
ctgttcgccagcgagcgggacaaccccgagacccaagagatagtcaccgaactgctcgaa
gacgtaatccggtttacgccgggcaataccctgctgtttttcccctcctactcggagtcc
gagcggtactacgaccggctcgacgacagcaacgcgggcgaactcgggacgctggtgctc
gatggctccgaccggtcgaccgaaaaactgcgcacacgattcgtcgacagcgacaacgcc
acgctctgtacctcgctgtgggggacgctggccgaaggcgtgagcttcgacggcgacgac
gcacggacggtcgtggtggttggggtgccgtatccgcatctctccgagcggatggatgcg
gttcaggatgcctacaatcgggcctacagcgacagtcgacgcacgcgggatgcgggctgg
gcctacgccgtcgagatcccgacgatccgcaaaacgcggcaggcccttgggcgagtaatc
cggtcacccgaggatttcggcgtccgaattctggccgacaagcggtacacacaggctgat
atggggaaatacagtgtgcgcgggagtttcccggtcgaagagcgcgaagagttcgtcgac
atcaagccgcaaaagctgaagtttgccatgctgaacttttatactgatcacgacgcttac
ggtggcgatccgccggaaccctga
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