Halohasta litchfieldiae: halTADL_2030
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Entry
halTADL_2030 CDS
T05239
Name
(GenBank) transcription initiation factor TFIIB
KO
K03124
transcription initiation factor TFIIB
Organism
hae
Halohasta litchfieldiae
Pathway
hae03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
hae00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
halTADL_2030
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hae03021
]
halTADL_2030
Transcription machinery [BR:
hae03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
halTADL_2030
Prokaryotic type
Archaeal type
TFB
halTADL_2030
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIB
Zn_Ribbon_TF
RB_B
DZR_2
FYVE
DUF8122
DZR
DUF8054_C
Zn_ribbon_6
DUF1272
PHF5
DUF7129
Motif
Other DBs
NCBI-ProteinID:
ATW88778
UniProt:
A0A1H6WV31
LinkDB
All DBs
Position
complement(1948981..1949976)
Genome browser
AA seq
331 aa
AA seq
DB search
MGEGLTVLASSRNTVRTMATRDIYETTFDEDVQTDTRSNQCPECDGRVTTNTVETVCEEC
GLVVDEQRIDHGPEWRGFDEDERERTGAPLTAARHDRGLSTEIGRGTDTNGNELSGKKRR
RLARMRREQTRGRFQSKAERNLAYGLGEVRRLASTLELSDSIRDQACQLFRSAQNEDLLR
GRSIEAIATASVYGACRCNDRPVILDEVADSARVELSRVRNAYKTLNTELGLPTPPRRPQ
SFIPRFASELDVADTVRQRAFELAKGAEATIISNGCQPTGVAAACLYKAAREQGQFFTQT
DLAEVAETTPVTIRTRWNELEEVDDSKSAPA
NT seq
996 nt
NT seq
+upstream
nt +downstream
nt
atgggtgaggggctcactgtactggcgagttcccgaaacacggtgagaacgatggcaact
agagacatctacgagacgacgttcgacgaagacgtccagaccgacacgaggtcgaatcag
tgtcccgagtgcgacggccgagtcaccactaatacagtcgaaaccgtctgcgaggagtgt
gggctcgtcgtcgacgagcagcggatcgaccacggaccagagtggcgagggttcgacgaa
gacgagcgtgaacggactggcgctccgttgacggcagcgcggcacgatcgggggttgtcg
acggagatcgggcgcgggaccgatacgaacgggaatgaactctccggaaagaagcgacgc
cggctcgcccggatgcggcgtgaacagacgcgcgggcggtttcagtcgaaagctgaacgc
aacctcgcatacgggctgggcgaggttcgccgtctggcgagtaccctcgagctctccgat
tcgatccgcgaccaggcgtgtcagctcttccggagtgcccagaacgaggacctgcttcgg
ggcagatccatcgaggccatcgccacggctagcgtgtacggggcctgccgctgtaacgat
cgaccagtgatactcgacgaggtcgctgattcagcacgcgtcgaactgtctcgagtgaga
aacgcgtacaaaacgctgaatacagaattaggactccctaccccaccgagaaggccgcag
tcgttcattccgcgcttcgcgtcagaattggacgtcgctgacacggtccgacagcgggcg
tttgaactcgcaaagggcgctgaagcgacgattatctcgaacggatgccaaccgacaggt
gtcgcagcggcctgcctctataaggctgctcgggagcagggacaatttttcacgcaaaca
gatctcgcagaggtggcggagacaacgccggtaacgatacgcacacgatggaacgaacta
gaggaggtcgacgattcgaagtcagcccccgcgtag
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