Halohasta litchfieldiae: halTADL_2094
Help
Entry
halTADL_2094 CDS
T05239
Name
(GenBank) DNA mismatch repair protein MutS
KO
K03555
DNA mismatch repair protein MutS
Organism
hae
Halohasta litchfieldiae
Pathway
hae03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
hae00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
halTADL_2094
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hae03400
]
halTADL_2094
DNA repair and recombination proteins [BR:
hae03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
halTADL_2094
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_I
MutS_IV
MutS_II
Kin17_mid
AAA_27
AAA_22
AAA_29
Motif
Other DBs
NCBI-ProteinID:
ATW88841
LinkDB
All DBs
Position
complement(2006437..2009163)
Genome browser
AA seq
908 aa
AA seq
DB search
MSQGIVEEFLSIKADSDADLLAMQCGDFYEFFADDAETVSDELDLTVSQKSSHGSSYPMA
GIPLSELTPYMKALVERGYRVAVADQFQDDNGDHYREITRLITPGTLIETTDAEAQYLAA
VVRADGNEGPYGLAFADITTGQFLVTEVDTAADAHAELYRFDPAEVLPGPDVRTDDDFSR
QLRERSDASLALFDTDAFAPGRSAHTVRDQFGSETVDSIGLDSELAVRAAGAVLSYVEET
GVGVRQSMSRLQLYTADDHLTLDATTQRNLELVETMHGDKGGSLLDTIDHTETSPGGRLL
REWLTRPRQDASELGRRLDCVETLTSAALPRERLRETLDGAYDLERLASQAASGSADARD
LLAVRDTLELLPTLADEIAGGQLADSPLSTVIDKPDRAAAAELRETLAEALADDPPKTVT
QGGLFKYGFDDELDDLIERHEEANEWLDGLADRIKRQYGLSHVTVDRNKTDGYYIQVGKS
QADSVPDSFQHIKTLKNSKRFVTDELAEREREILRLEESRGELEYERFAELRDQVAEQSA
LLQDVGRALAEVDVLCSLASHAAANSWCRPELTTAGTLDIEAGRHPVVEQATEFVPNDLT
LDDKRGFLIVTGPNMSGKSTYMRQSALITLLAQVGSFVPARSTTVGIVDGIYTRVGALDE
LAQGRSTFMVEMQELSNILHSATQDSLVILDEVGRGTATYDGISIAWAATEYIHNQIGCH
CLFATHYHELTALASHLDRVGNVHVAADERDGEITFLRTVQEGATDRSYGIHVADLAGVP
MPVVDRARNVLTKLREEKAIEAKGAASGGEAKQAVFDLSAGEFQTSETNGAATASGAATA
ETDRRESAETTASTRAATHSESAATEPESVDPAAQEVLAAIESTDINETPPVELMTKVQQ
WQKQLDET
NT seq
2727 nt
NT seq
+upstream
nt +downstream
nt
atgtcacagggaatcgtcgaggagtttctctcgatcaaagccgacagcgacgccgatctg
ttggcgatgcagtgtggcgatttctacgagtttttcgcggatgatgccgaaaccgtcagc
gacgaactcgatcttaccgtctcgcagaaatcctcgcatggctcatcgtatccgatggcc
ggaatcccgctctcggagctgacgccgtatatgaaggcgctcgtcgaacgcggctaccgg
gttgccgtggccgaccagtttcaggacgacaacggcgaccactaccgcgagattacgcgg
ctcataactccggggacgctcatcgaaaccaccgatgccgaggcccagtatctcgctgcg
gtcgtccgagcagacggaaacgaaggtccctatggattggcgtttgccgacatcaccacg
ggccagttcctcgtcaccgaagtcgacaccgcggccgacgcccacgccgaactgtatcgg
ttcgatcccgctgaggtgctgcccggacccgacgtgcgaactgacgacgacttttctcga
caactccgagagcgaagcgacgcctcactggcactgttcgataccgacgccttcgcgccc
ggtcggagtgcccacacggtcagagaccagttcggcagcgaaacggtcgacagcatcggt
cttgattccgaactcgcggttcgtgcggcgggtgcagtgctctcgtatgttgaagagacc
ggcgtcggggttcggcagtcgatgagtcgactccaactgtacacggccgacgaccacctc
acgctcgatgccaccacacagcgcaacctcgaactcgtcgagacgatgcacggggacaaa
ggtggctcgctgctcgacaccatcgaccataccgaaaccagccccggcggtcgactgctt
agagagtggctaacgcgcccccgacaggacgcgagtgagctcgggcgtcgactcgactgt
gtggaaaccctcacatcggccgccctgccacgtgagcgcctccgagagacgttagacgga
gcctacgatctcgaacggctggccagtcaggccgccagcgggagcgccgacgcccgggat
ctgctggcagtgcgggacaccctcgaactactgccaacgctggccgacgagatcgcgggt
ggccaactggccgactcgccgctgtcgacggtgatcgacaaaccggatcgggcggccgcc
gccgagctccgcgagacgctcgcggaggcactcgccgacgatccaccgaaaaccgtcact
cagggcggcctatttaaatacgggttcgatgacgaactcgacgacctcatcgagcgccac
gaggaggcaaacgagtggctcgatggactcgccgaccggatcaaacgccagtacggcctc
tcgcatgtgaccgtcgaccggaacaagacggatggctactacattcaagtcggcaaatcc
caagcggattcggtgcccgactctttccagcacattaagacactcaaaaactccaaacgg
ttcgtcaccgacgaactcgccgagcgggagcgcgaaatcctccggctcgaagagtcccgc
ggggaactggagtacgaacggttcgcggagcttcgggatcaggtcgccgagcagtcggca
ctcctgcaggatgtcgggcgggcgctggcggaggtcgacgtgctgtgttcgctggcgagc
cacgccgcggccaacagctggtgtcgacccgaactaacgacagcaggaacgctcgatatc
gaagccggacgccacccggtcgtcgaacaggccaccgagttcgtaccaaatgatctcaca
ctcgacgacaagcgcgggtttctgatcgtcaccgggccaaacatgagcgggaagtcgacc
tacatgcggcagtccgcgctgatcacgctgctggcacaggtcgggagtttcgtccctgcc
cggtcgacgaccgtcggcatcgtcgacggaatttacacgcgtgtgggcgcactggacgaa
ctcgcgcagggtcgctctacgttcatggtcgagatgcaggaattatcgaacattctccat
tcagcgacccaagactcgctggtgattctcgacgaggtgggtcgggggaccgccacctac
gacgggatctcgattgcgtgggcggccaccgaatacattcacaaccagatcggctgtcac
tgcctgtttgcgacccactaccacgagttgacggcgctggcatcgcatctggatcgggtt
gggaacgtccacgttgcggccgacgagcgggacggcgagattacgtttctgcgaacggtc
caagagggggcgacagatagatcatatgggattcacgtcgccgatctggccggcgtgccg
atgccggtcgtcgaccgggcgcggaacgtgttgacgaaactccgcgaggagaaagcgatt
gaggcgaaaggagccgccagcggtggcgaggccaaacaggcagtgttcgatctcagtgcc
ggagagttccaaacctccgagaccaacggcgccgccactgccagcggtgcggccacagcc
gagaccgaccggcgggagtccgcagagaccacagcctcgacacgcgcggctacccactcg
gagtcagcagccaccgagccggagtcggtcgatcctgccgcacaggaggtgcttgcagcc
atcgagtcgaccgatatcaacgaaacgccacccgtcgaactgatgacgaaagtccaacag
tggcaaaaacagttggatgaaacctga
DBGET
integrated database retrieval system
