Halohasta litchfieldiae: halTADL_2161
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Entry
halTADL_2161 CDS
T05239
Name
(GenBank) DNA topoisomerase-1
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
hae
Halohasta litchfieldiae
Brite
KEGG Orthology (KO) [BR:
hae00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
hae03032
]
halTADL_2161
03400 DNA repair and recombination proteins [BR:
hae03400
]
halTADL_2161
Enzymes [BR:
hae01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
halTADL_2161
DNA replication proteins [BR:
hae03032
]
Prokaryotic type
DNA Topoisomerases
halTADL_2161
DNA repair and recombination proteins [BR:
hae03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
halTADL_2161
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Auto_anti-p27
Zn_ribbon_Top1
NucS_N
Zn_ribbon_6
DNA_ligase_ZBD
Cas12f1-like_TNB
DUF7351
HypA
Zn_ribbon_FGT1_1
Cupin_6
DmmA-like_C
Zn_ribbon_LysW
Motif
Other DBs
NCBI-ProteinID:
ATW88908
UniProt:
A0A1H6TNN1
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All DBs
Position
2070052..2070810
Genome browser
AA seq
252 aa
AA seq
DB search
MSEKTRILAGDCTVRFEGTRDRIQRGHVVILVKPDRTVLVHDADGYQPVAWLTRPDDVTI
EHDGEGFSLRAHADSQELLVTSNSATGLQSVAVSEAGVPVGTCPDCEGPLVRTRGEIRCL
DCEDRYGIPTGATVLDSSCADCGLPQMRVDRGDSFELCVDYGCESLSTAVHERFDEEWDC
PDCGSSLKVRSPDGRIFLGCDGYPNCETSFSFPSGLVVDDCECGLPRFRTASGERCLDGG
CEAMPESESPSP
NT seq
759 nt
NT seq
+upstream
nt +downstream
nt
atgtccgagaagacacggatactcgccggagactgtaccgttcgcttcgaaggaacccga
gaccgcatccagcgcggccacgtcgtcattctggtcaagcccgaccgaactgtgctcgtt
cacgacgccgatggctaccaaccggtcgcgtggctcactcgcccggatgatgtcacaatc
gaacacgacggtgaaggattcagtttgcgtgctcacgccgatagtcaagagctgttggtc
acctccaactcggcgactggtctccagtcggttgcggtttcggaggccggcgttccggtc
ggcacctgtccggactgtgaggggccgctggttcgaactcgtggagagatccggtgtctc
gactgcgaggaccgctatgggattcccaccggcgcgacagttctggactcatcgtgtgct
gactgtggcctcccgcagatgcgcgtcgaccgcggcgactcgtttgagctgtgtgtcgac
tacggctgcgagtcgctgtcgaccgcggtccacgagcggttcgacgaggagtgggactgt
cccgactgtggctcgtcgctcaaagttcgcagcccggatgggcggatcttcctcggttgt
gacggctatccgaactgtgagacctcattttcgttcccgtcagggctcgtggtcgacgac
tgtgagtgcgggttgccacggttccgcacggcctccggcgagcgatgtctagatggcggc
tgcgaggccatgccggagtccgaatcaccgtcgccgtaa
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