KEGG   Halohasta litchfieldiae: halTADL_2168
Entry
halTADL_2168      CDS       T05239                                 
Name
(GenBank) tRNA-intron endonuclease
  KO
K01170  tRNA-intron endonuclease, archaea type [EC:4.6.1.16]
Organism
hae  Halohasta litchfieldiae
Brite
KEGG Orthology (KO) [BR:hae00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:hae03016]
    halTADL_2168
Enzymes [BR:hae01000]
 4. Lyases
  4.6  Phosphorus-oxygen lyases
   4.6.1  Phosphorus-oxygen lyases (only sub-subclass identified to date)
    4.6.1.16  tRNA-intron lyase
     halTADL_2168
Transfer RNA biogenesis [BR:hae03016]
 Prokaryotic type
  tRNA spricing factors
   tRNA splicing endonucleases
    halTADL_2168
SSDB
Motif
Pfam: tRNA_int_endo tRNA_int_endo_N
Other DBs
NCBI-ProteinID: ATW88915
UniProt: A0A1H6TXT1
LinkDB
Position
2075525..2076610
AA seq 361 aa
MNGQLRDGVVEIGGNARQQFYDARGYGTPNGGNEIRVSRVEAAHLLFRGDLDRIVDHDGS
GDHLDFQAFFVASASTADRFALRFLVYAELRDRGFYLSPARDGWPGEDGNEWTDLTVYPR
GTKPGDGEPAHRIVVVGERASIPASDMGGVTFAIVDEESEISYLETESPDFDGGTTYQLP
DSLTGSLIDDRVVVWDAPDGFYDHGFYGQPLTAREAIVDSAVQLSLVEAAGLAAEGHLEL
TDVDSVDDSATEAIRERGRAVEGERFDRRLAVYRALRSQQVVPKTGYKFGADFRTYNTVE
SVDELPHSEHLVRVVEPDHAFDPRELSLDVRLAGGVRKRMVFALTGAKGEIDWLTVSRLT
P
NT seq 1086 nt   +upstreamnt  +downstreamnt
atgaacggacagctccgcgacggcgtcgtcgagatcggcggcaacgcccgccagcagttc
tacgacgcccgcggctacggcactcccaacggcggcaatgaaatccgtgtctcccgtgtt
gaggccgcccatctgctgtttcgcggcgacctcgaccgtattgtcgaccacgacggcagc
ggcgaccatctcgactttcaggcgttctttgttgcctctgcgtcgactgccgaccgcttt
gcgctccgatttctggtgtacgccgaactccgtgaccgaggcttctatctctcgcccgcc
cgcgatgggtggcccggcgaggacggcaacgagtggaccgatctcacggtctaccctcgt
ggtactaaacccggtgacggcgaaccggcccaccgaatcgtggtcgtcggcgagcgcgct
tcaattcccgccagcgatatgggtggggtgacattcgctattgtcgacgaggaaagcgaa
atctcctatctcgaaactgaaagccccgactttgacggcggaaccacctaccagctgccc
gactcactcactggctcgctcatcgacgaccgagtcgtcgtctgggatgctccggatggg
ttctacgaccacgggttctacggccagccgttgaccgcacgggaggcaatcgtcgactcc
gcagtccaactctcgctggtcgaggctgctggtcttgcggctgagggccacctcgaactc
accgacgtcgacagcgtcgacgactccgcaaccgaggcgatccgcgagcgtggccgggct
gtcgagggcgagcgattcgaccgccggctggcggtttatcgcgccctccgtagccagcag
gtcgtccccaaaacagggtacaagttcggtgcggatttccggacctacaacaccgtcgag
tcggtcgacgagttgccccactccgaacatctcgttcgggtcgttgagccagaccacgcg
ttcgatccccgcgagctatcgctggatgtacgactcgccggtggggtcaggaaacgaatg
gtttttgcgctgaccggagcgaaaggagagatagactggctcaccgtgagccgacttacg
ccatga

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