Halohasta litchfieldiae: halTADL_2192
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Entry
halTADL_2192 CDS
T05239
Name
(GenBank) dsDNA-specific endonuclease/ATPase MutS2
KO
K07456
DNA mismatch repair protein MutS2
Organism
hae
Halohasta litchfieldiae
Pathway
hae03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
hae00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
halTADL_2192
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hae03400
]
halTADL_2192
DNA repair and recombination proteins [BR:
hae03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
halTADL_2192
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GFIT
Motif
Pfam:
MutS_V
HHH_5
HHH
AAA_29
RecR_HhH
Motif
Other DBs
NCBI-ProteinID:
ATW88939
UniProt:
A0A1H6V8J5
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Position
2107937..2109916
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AA seq
659 aa
AA seq
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MEFEAIPGVGQKTAAALAELDDPETALETGDVLTIAAAPGVTDGRAAAIARGAIQRRHDD
PGGFLATDRSKSLYDDALSLLQERAVTTYATKRLETLYPSPRQSRINEVRELVDRALSHE
PDTAVLDALGGVEPLESPSGLRVRDRCLATADAEQYAKAKSKMPELSAEVVDDARDIDEL
ARSYATVFVLDESFAGIDIDGDVRILPDALDKPETVVPERLLSVFATNRDRIMAAAEVHR
LAGLEPPCDLDALEDGLSRVDDDGTIVGDDELRRLEVAVDDLDAAVGTAESVANDYLRDA
IKERNVTIEGQDFLSLVEQGARVDSLLARELDEDFETAVKKSRTHLTESLSLAPEEAELA
DRIFDGDPTFPINRREDAVGRLKNELTAARDRRATSLKTELAADLADLRGPVDQLVRNAL
ELDVELAIARFGRDFDCVMPAFDDPETGFEIRAGRSPLLDVEFEDVDPVDYGVEGVTLLS
GVNSGGKTSLLDLVGLIVILAHMGLPVPAESVRLQRFTELHYYAKSQGTLDAGAFESTLK
EFGDLISGADGRLVLVDELESITEPGASAKIIAGILEALDTQGATAVFVSHLADEIREAS
AVDVAVDGIQATGLVDGKLQVNRSPVKNHLARSTPELIVEKLAGEATDATFYESLLEKF
NT seq
1980 nt
NT seq
+upstream
nt +downstream
nt
atggagttcgaagcgattccgggtgttggccagaagacagccgccgcactcgcggagctc
gacgaccccgagaccgccctcgaaacgggtgacgtgctgacgattgcggcggctcccggc
gtcaccgacgggcgggccgcggctatcgctcgcggcgcgatccagcgccgtcacgacgat
cccggcggctttctggcaactgatcgctccaagtcactgtacgacgatgccctctcgctc
ctccaagaacgcgccgtaaccacgtacgctacaaaacgactcgaaacgctgtatcccagc
ccccggcagtcccgtatcaacgaggtccgcgagttggtcgaccgcgccctctctcacgag
ccagacacagctgtcctcgacgctctcggcggcgtcgaaccactcgaatcgccctcggga
ctccgcgttcgggaccgctgtttggcgaccgccgacgccgaacagtacgccaaagccaag
agtaagatgccggagctatcggccgaagtcgtcgacgacgcccgagacatcgacgaactg
gcccgctcgtatgccaccgtcttcgtcctcgacgagtcgttcgccgggatcgatatcgac
ggcgacgttcggattctgcccgacgccctcgacaaacccgagacagtcgtccccgaacgc
ctgctgtcggtgtttgcgacgaatcgcgaccgaatcatggctgccgccgaggttcatcga
ctggccggactggagccgccgtgtgatctcgacgcactcgaagacggcctctcgcgtgtc
gacgacgacggtaccatcgtcggtgacgacgaacttcggcggctcgaagtcgctgtcgac
gatctagatgcggcggtcggcaccgccgaatcggtcgccaacgactatctccgggatgcg
atcaaggagcgaaacgtcaccatcgagggccaagacttcctctcgctggtcgaacagggc
gcgcgcgtcgactcgcttctggcccgcgaactcgacgaggatttcgaaaccgcagttaaa
aagtcccgaactcatctcaccgagagtctctcgcttgcgcccgaagaagctgaactcgcc
gaccgaattttcgatggcgatccgaccttcccgatcaatcgacgcgaggacgctgtcggt
cggcttaaaaatgaactcaccgccgcccgtgaccgccgggcaacctcgttaaaaacggag
ttggccgctgatctcgccgaccttcgagggccggtcgaccaactggttcgaaacgccctc
gaactcgacgtggaactcgctattgctcgcttcgggcgggatttcgactgcgtgatgccg
gcgttcgacgaccccgagaccggtttcgagatcagggctggtcggtcgccgctgttggat
gtcgagttcgaagacgtcgacccagtcgactacggagtcgaaggcgttacactcctctct
ggtgtcaactccggcggaaagacgtcactgctggatctcgttgggctgatcgtgattttg
gctcacatgggactgccagtgcccgccgaatcggtccggctccagcggtttaccgaactg
cactactacgccaaatcgcagggcacgctggatgcgggggccttcgagagcacgctcaag
gagttcggtgacctgatttcgggggccgatgggcggctcgttctggtcgacgagttggag
tcgattaccgaacccggcgcgagcgcgaagatcattgctgggattttggaagcactggac
acacagggtgcgaccgccgtcttcgtctctcaccttgccgacgagattcgggaggcgtcg
gctgtcgatgtcgcggtcgacgggattcaggcgactggactggtcgacggcaagctacag
gtcaaccggtcgccagtaaagaatcacctggcgcggtcgacgccggagttgattgtcgag
aagctcgcgggggaggcgaccgacgcgacgttttacgaatcactgttagagaagttctaa
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