Halohasta litchfieldiae: halTADL_2593
Help
Entry
halTADL_2593 CDS
T05239
Name
(GenBank) ATP-dependent helicase/nuclease subunit A
KO
K16898
ATP-dependent helicase/nuclease subunit A [EC:
5.6.2.4
3.1.-.-]
Organism
hae
Halohasta litchfieldiae
Brite
KEGG Orthology (KO) [BR:
hae00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hae03400
]
halTADL_2593
Enzymes [BR:
hae01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
halTADL_2593
DNA repair and recombination proteins [BR:
hae03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
halTADL_2593
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
PDDEXK_1
UvrD_C
AAA_19
UvrD_C_2
Cas_Cas4
AAA_30
DEAD
Motif
Other DBs
NCBI-ProteinID:
ATW89324
UniProt:
A0A1H6RUB9
LinkDB
All DBs
Position
complement(2506969..2510856)
Genome browser
AA seq
1295 aa
AA seq
DB search
MSQDTRSTAGESSDIDLQLSLEDGEGPPHPPVDDQRAVLASYFEGTGRVVVDASAGTGKT
TTLVVTLAETIVRTASETDNPLSDILVTTFGRDATAELKTRLKGLLRHHVDNGGGLPQDV
FRWIETESNIQTLDALFADLLREIAIEATVPPDFNVDDRLELQRLREEIFADLRREYRSE
FRTLEEAYPAEEWRTYPPDTVEEMLASAQQNCREFGISTAEAAESLRESLIVGYGGDGGH
WLGETDTETRPNSVPPETVDDITAILRAVVSEDAELSVDSEADAQQLLAHVRATYFETEA
AIDAFATLLTAYERAYDSRTRRAGQFTFTDVAHLLNSYLDDCEPTAPFRQTLGQRFDHVF
VDEFQDTSTVQCAVLRRLVEPEDESGGTDEDGSNLFLIGDSKQAIYEWRSADPALFAEII
ETTQAVAPDPATIPHLNVSGVRYHALTTVFRHHPDIAAAANHVFQRLLGDEGRGAVDGSG
PSYVPVDPYGSPWEANTETAETTESDNNDDDSHIHVLNVGATSEDLSEYIAAADWAAAES
TRVAETIAAITDPDTEEPPVTIQTAGGEEDTDDEPSRQPTPGDITLLFRSTRQMERYATV
LREEYDIAAEAVATGDLFEQPEIQLLIDLLSWIARPYDIDLRRLLRSPLVALSDETIRTV
VATDSELETLVDAWPESLPADDRQRLAGLVSLREDLNWVRETSKTALIHRLLQHSGLDAV
LLSDSDGLRRYGNVWLLTELVDDWEVDELLSYREFRSRLRALRGGTDSSDPQFSVADRDS
ERGDAVTLTTVHQAKGQEYPIVFLCDLPKPSNYPRLQHDRLVMSRRDGFGLRPRPGTPPS
PEGVEFPTPDSDRSRPVWFNDDLDTDYPDATGPIWLSDARTETGAFRYPNPLNSHLKAHE
AEFWRLAYVAFTRAEDHVFLGVGDLDTNSDYYDQAQWTTWLAAFNETLAPDAGWDSITDR
DPADRTISQDLSWRVDADQEISETVSIGVDEIPPQSPKPTPELDLLDELGRLPGSGDEID
TQTYRPRTVSASSLATLASCPRAFQYRHVQAIEAVRQPSRSGRLDQPVASTASTQPPGSL
APNEWGDIVHRAIELRLSDPERAGQYIRDQPEAVESQLRTVLTAVESSTLFEQCQSTAGE
WVTEYDLSDLVSTEGRELRLTGTVDLLYRSEGAWHLVDWKTGQRPADPADSAHSQQLSVY
AWLLERQFGITVETATLGYIDPAAEPVLTPVAVTDNLDTEWVDRTVVDASDALPIPSADG
LETRPDPETCGSCPYAASVGGPCTDDYHATDADSE
NT seq
3888 nt
NT seq
+upstream
nt +downstream
nt
atgagccaagacactcggtcgactgctggcgagtccagcgacatcgaccttcagttgtct
cttgaagatggtgagggaccgccccatccgccggtcgacgaccagcgagcggtgttggcg
agctactttgaaggcactggtcgggtggtggtcgacgcttccgcaggcactgggaagaca
accacgctcgtggtgacgctggccgaaaccatcgtccgaaccgccagcgagaccgacaat
ccgctgtcggatattctcgtgacgacgttcggtcgggatgcgactgccgaactcaaaacc
cgactcaaaggactgcttcggcatcacgtcgacaacgggggtgggcttccgcaggacgtg
ttccggtggatcgaaaccgagagcaacatccagacgctggatgcgctgttcgcggatctg
ctccgggagattgccatcgaggcgactgtaccgccggatttcaacgtcgacgaccgactc
gaactccagcgactccgtgaggagattttcgcggatctccgccgggagtaccgcagcgag
ttccggacgctcgaagaggcgtatccggccgaggagtggcgcacgtatcctccggatacc
gtcgaagagatgctggcttcggcccaacagaactgccgtgagttcggtatctcgacggcc
gaggctgccgaatcgcttcgggagagcctcattgtgggttatggcggtgacggcggccac
tggctcggtgagactgacacggagaccagaccaaactcggttccaccggagacggtcgac
gacatcactgcaattctcagggcggtcgtcagcgaggatgcggagctctcggtcgactcc
gaggccgacgcccagcagctactggcacacgtcagagcgacctacttcgagaccgaggcc
gccatcgatgcgtttgccaccctattgacggcttacgagcgggcgtacgacagccgaacg
cggcgggccgggcagttcacttttaccgatgtcgcacacctgctcaacagctatctcgac
gactgcgagccgaccgctccgttccggcagacactgggccagcggttcgaccacgtcttc
gtcgacgagtttcaggacacgagtacggtccagtgtgccgtgcttcgtcgacttgtcgag
cctgaggacgagagtggtggtaccgacgaggatggatcgaacctgtttctgatcggcgac
agcaagcaggccatctacgaatggcggtcggccgaccccgcgctgttcgccgagatcatc
gaaacgacacaggctgtggcccccgacccggcgacgataccgcatctcaacgtcagtggt
gtgcgctaccacgcgctgacgacggtgtttcggcatcatcccgacatcgccgcggccgcg
aaccacgtctttcagcggctgcttggggacgagggccgcggcgcagtcgacgggtcggga
ccgtcgtatgtccccgtcgacccctacggctcgccgtgggaagccaatacagagactgct
gagaccactgagagcgataacaatgatgacgactctcacatccatgtcctcaatgtgggt
gcgaccagcgaggatctgagtgagtatattgcggccgccgactgggcggctgccgagtcg
acgcgcgttgccgagacgattgcagcgatcaccgaccccgatacggaggagccaccagtg
actatccaaaccgccgggggcgaggaagatactgacgacgagcctagccgacagcccaca
ccgggcgacatcaccttgctgtttcggtcgacacgccagatggagcgctacgcaaccgtc
ctccgcgaggaatacgacatcgctgccgaggcggttgcgaccggcgacctcttcgagcag
cccgaaatccaactactgatcgatctgctgtcgtggatcgcccgaccatatgacatcgat
ctccgtcgactgctccggtcgccgctggtcgccctctccgacgagacgatccgaacggtt
gtcgccacagactccgagttggagacgctcgtcgacgcgtggccggaatcgcttccggcc
gacgaccgccagcgactcgccgggctggtgtcgctccgtgaggatctcaactgggtgcgc
gaaacctcgaagacggcgcttatccaccgcttgctacagcactccggactggacgcggtg
ctgctgagcgacagcgacgggcttcggcgctacggcaacgtctggctgttgaccgaactc
gtcgacgactgggaagtcgacgaactgctttcttaccgggagttccgcagtcgactccga
gcgcttcgaggcggaaccgacagcagcgacccgcagttttcggtcgccgaccgcgatagc
gagcgtggcgatgcggtcacgctgacgacggtccatcaggccaagggccaagagtacccc
atcgtgttcctctgtgatctgccgaaaccctcgaactacccccgactccaacacgaccga
ctggtgatgagtcgacgggatggtttcgggctccggccacgccccggcacgcccccgagt
ccggagggtgtcgagttcccaacgccagattcggatcgcagtcggcccgtctggttcaac
gacgatttggacaccgactaccccgatgcgacgggaccgatctggctttcggatgcccgg
accgagactggcgcgttccggtaccccaacccactgaatagccatttaaaagcccacgag
gcggagttttggcggctggcctacgtggcgttcacccgcgccgaggaccacgtctttctt
ggagtgggtgatctggatacgaactccgactactatgaccaagcgcagtggacgacatgg
ctcgcggcgttcaacgagacgctagcccccgacgctggctgggattcgatcaccgaccgc
gaccctgcggatcgaacaatttcgcaagatctctcgtggcgcgtcgacgcggaccaagaa
atctcggagaccgtttcgattggcgtcgacgagataccaccgcagtcccccaaaccgaca
cccgaactcgatctcctcgacgagttgggtcgactgccgggcagtggcgacgagatcgac
acccagacataccggccacgaaccgtctcagcgtcatcgctcgccacgcttgcgtcctgt
ccgcgtgccttccagtaccgtcacgtccaagcaatcgaagccgtccgccagccgtctcgg
tcgggtcggttggatcaaccggtcgcgtcgaccgcgtcgacacaaccgccgggttccctc
gcccccaacgagtggggcgacatcgtccaccgggcgattgagctacggctgagcgacccc
gagcgcgcagggcagtatattcgagaccagccggaggcagtcgagagccaactgcgaaca
gtcctcacggcggtcgagtcgtccacactcttcgagcagtgtcagtcgacggctggcgaa
tgggtcactgagtacgatctctcagatctcgtctcgaccgagggacgcgagctccgtctg
accggaaccgtcgacctgctgtatcgaagcgagggggcgtggcacttagtcgactggaaa
accggccagcggccagcagacccagcggactcggcacacagccagcaactctccgtgtac
gcatggctcctcgaacggcagttcggaatcacggtcgagaccgcgactctcggctacatc
gatcccgccgcggagccagtcctcacaccggttgctgtgacagacaatctcgatactgag
tgggtcgaccgaacagtcgtcgacgcgagcgacgcgctcccgattccctccgcggatggt
ctcgaaactcgtccggaccccgagacctgtggcagttgtccctacgcagcgagcgtgggt
ggaccgtgtactgacgactatcacgcgactgacgcggactccgagtag
DBGET
integrated database retrieval system
