Halohasta litchfieldiae: halTADL_2699
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Entry
halTADL_2699 CDS
T05239
Name
(GenBank) N-glycosylase/DNA lyase
KO
K03660
N-glycosylase/DNA lyase [EC:3.2.2.-
4.2.99.18
]
Organism
hae
Halohasta litchfieldiae
Pathway
hae03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
hae00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
halTADL_2699
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hae03400
]
halTADL_2699
Enzymes [BR:
hae01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
halTADL_2699
DNA repair and recombination proteins [BR:
hae03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
halTADL_2699
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
OGG_N
AlkA_N
Motif
Other DBs
NCBI-ProteinID:
ATW89417
UniProt:
A0A1H6VXK3
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All DBs
Position
complement(2618220..2619134)
Genome browser
AA seq
304 aa
AA seq
DB search
MEQGVIRLDDLDGRFDLQSTVESGQSYLWDRADGEMYETTAAYGGSAWYETVVAPIPGVS
DEQAVVRVRQDGEELQWESTTDAVPILTHLLRLDDDLDAIEDATPDDPLLDRAFEQYSGM
RLVRDPVFPCLISFICSAQMRVARIHGMQRRLAREYGDEIEFDGRTYHAFPTPAQLAERT
EAELRELSLGYRAPYVQRTAEMIATGEVDPLDAIDLDYEDARDHMSQFVGVGNKVADCVL
LFSLGFTEAVPLDTWIQTAIADHYPDCDRGGYVSTSRAIREQFGGQYAGYAQTYVFHYLR
NGGN
NT seq
915 nt
NT seq
+upstream
nt +downstream
nt
atggaacagggcgttattcggctcgacgatctcgatgggaggttcgatctgcagtcgacg
gtcgaaagtggccagagctatctgtgggaccgcgccgacggcgagatgtacgagacgacg
gccgcctacggtgggtcggcgtggtacgagacggtcgtcgccccgataccaggcgtctcc
gacgaacaggccgtcgttcgcgttcgacaggacggcgaggaacttcagtgggagtcgacc
acggatgccgtcccgattctcacacacctgctgcgacttgacgacgacctcgatgccatc
gaagacgccacacccgacgacccactgcttgaccgggcgtttgaacagtattcggggatg
cgactcgtgcgtgatcccgtctttccctgtctgatctcgtttatctgttcggcccagatg
cgggtggcacggattcacgggatgcagcgtcgactggctcgggagtacggcgacgagatc
gagttcgacggccgaacgtaccacgcgtttccgaccccggcccaactggccgagcgaacc
gaagccgaactccgggagctgagtctcggctaccgcgcgccatacgtccagcgcaccgcc
gagatgatcgccaccggcgaggtcgacccactcgatgcgattgatctcgactacgaggat
gcccgcgaccacatgagtcagttcgtgggtgtcggtaacaaggtcgccgactgcgtgttg
ctgttttcgcttgggttcaccgaggcagtgccactggacacgtggattcagacagcgatt
gcagatcactatcccgactgcgaccgtggggggtatgtgtcgacctcacgggccatccgc
gagcagttcggcgggcagtatgcgggctatgcccaaacctacgtttttcattatctccgt
aacggcggaaactga
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