Halohasta litchfieldiae: halTADL_3070
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Entry
halTADL_3070 CDS
T05239
Name
(GenBank) transitional endoplasmic reticulum ATPase
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
hae
Halohasta litchfieldiae
Pathway
hae04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
hae00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
halTADL_3070
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hae03019
]
halTADL_3070
03009 Ribosome biogenesis [BR:
hae03009
]
halTADL_3070
04131 Membrane trafficking [BR:
hae04131
]
halTADL_3070
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
hae04147
]
halTADL_3070
Messenger RNA biogenesis [BR:
hae03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
halTADL_3070
Ribosome biogenesis [BR:
hae03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
halTADL_3070
Membrane trafficking [BR:
hae04131
]
SNARE
SNARE associated proteins
Others
halTADL_3070
Autophagy
Aggrephagy
Other aggrephagy associated proteins
halTADL_3070
Exosome [BR:
hae04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
halTADL_3070
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
CDC48_N
AAA_lid_3
CDC48_2
AAA_16
RuvB_N
AAA_5
TIP49
AAA_22
AAA_2
AAA_33
AAA_14
nSTAND3
NPHP3_N
IstB_IS21
RNA_helicase
AAA_28
AAA_7
Mg_chelatase
AAA_18
ATPase
AAA_25
Sigma54_activat
ABC_tran
AAA_17
DUF815
AAA_3
AAA_24
NB-ARC
Parvo_NS1
TsaE
AAA_11
AAA_30
Vps4_C
SLFN-g3_helicase
Zeta_toxin
NACHT
PhoH
AAA_lid_PRS2_C
IPT
ATP-synt_ab
Zot
Motif
Other DBs
NCBI-ProteinID:
ATW89772
UniProt:
A0A1H6RMB3
LinkDB
All DBs
Position
2968307..2970535
Genome browser
AA seq
742 aa
AA seq
DB search
MNEVQLEVAKAYPNDSGRGIARLDPDTLLHLKLSPGDIIEIEGGETTAAKVWRADRQDWN
TDTVRIDGFTRQNADVGIGERVTIRKAEAEKADKLVLAPPEEASVQFGSDAAGMVKRQIL
KRPVVERDIVPVMSSTNHPFMRSPGQAIPLIAVETEPDGVCLITEDTEVELREEPISGFE
KTGGGITYEDIGGLQSEIQRVREMVELPMKHPQIFKKLGIEPPQGVLLHGPPGTGKTLLA
KAVANETSASFFSIAGPEIISKYYGESEQQLREIFEDAKEESPSIIFIDELDSIAPKRED
VTGEVERRVVAQLLTMMDGLEARGQVIVIAATNRVDSVDPALRRPGRFDREIEIGVPDEV
GRKEILQIHTRGMPLSDDVSLDHLADETHGFVGADIESLTKEAAMKALRRYLPEIDLDEE
DIPPSLIDRMIVKRSDFGGALNEVEPSAMREVLVELPKITWDDVGGLESPKQQVKESVEW
PLSSPEKFDRMGVDAPKGVLLYGPPGTGKTLMAKAVASETNANFISVRGPQLLSKWVGES
EKAIRQTFRKARQVSPTIIFFDELDSLAPARGQDMGNNVSERVVNQLLTELDGLEEMGNV
MVIGATNRPDMIDPALIRSGRFDRLVMIGQPDEEGREQILRIHTGDTPLAPDVSLREIAE
ITDGYVGSDLESIARESAIEALRDDDDATEVEMQHFRRAMESVRPTVTEEILSYYEDIED
QFRGGGGREQLGERRDGRIGFQ
NT seq
2229 nt
NT seq
+upstream
nt +downstream
nt
atgaacgaagttcaactcgaagtggcgaaggcgtaccccaacgattcgggacgtggtatc
gctcgcctcgaccctgacacactgctgcatctcaaactctcaccgggcgacatcattgag
atcgagggtggcgaaacgaccgctgcgaaggtgtggcgggccgaccggcaggactggaac
actgacaccgttcggatcgacggcttcacgcgccagaacgccgatgtcggcatcggcgag
cgcgtgacgatccgcaaggctgaggccgaaaaagcggacaaactcgtgctcgcaccgcct
gaagaagcgagcgtccagttcggttccgacgccgcgggcatggtcaaacgccagatcctc
aagcggccggtcgtcgagcgcgacatcgtgcccgtgatgagttccacgaatcacccattc
atgcggtcgccggggcaagcaatcccactgatcgccgtcgagaccgaaccggatggcgtc
tgtctgatcaccgaagacaccgaagtcgaactccgcgaggagccgatcagcggcttcgaa
aagaccggcggcggcatcacctacgaggacatcggtggcttgcaaagcgagatccaacgt
gtccgcgagatggtcgagctgccgatgaagcatccccagatcttcaaaaagctcggcatc
gagccgccacagggggtgttgctccacggtccaccgggcaccgggaagacactgcttgcg
aaggcggtcgccaatgaaacctccgcgagtttcttctctatcgctggccccgaaatcatc
tcgaaatactacggggagtccgaacaacagctcagggagatcttcgaagatgcgaaagaa
gagtcgccgtcgatcatcttcatcgacgaactcgattctatcgcgcccaaacgcgaggac
gtcaccggcgaggtcgaacgccgcgtcgtcgcccaactgctgacgatgatggacggcctc
gaagcacgtggtcaggtgatcgtgattgcagccaccaaccgcgtcgactcggtcgacccg
gcacttcgtcgaccgggccgcttcgaccgtgagatcgaaatcggcgtgccggacgaagtc
ggccgcaaggagatcctccagatccacacccgcggcatgccactatcggacgatgtctcg
ctggaccatctggccgacgagacccacggcttcgtcggggcggatatcgagagcttgacg
aaggaagccgcgatgaaagcactccggcgctacttaccggagatcgatctcgacgaggag
gatatcccgccgagcctgatcgaccggatgatcgtcaagcggagcgacttcggcggcgcg
ctcaacgaggtcgaaccctccgcgatgcgcgaggttctggtcgagctgccgaagatcacg
tgggacgatgtcggcgggctcgaatcgccgaaacagcaggtcaaggagtcggttgagtgg
ccgctgagttccccagagaagttcgaccggatgggcgtcgacgcgccgaaaggcgtgttg
ctgtacggcccacccggaaccggcaagacgttgatggccaaggcggtcgccagcgagacg
aacgcgaacttcatttcggtgcgtggcccacagctgctatcgaagtgggtcggcgagtca
gaaaaggcgattcgccagacgttccggaaggcacggcaggtcagcccgacgatcatcttc
ttcgacgagcttgacagcctcgctccagctcgcgggcaggacatgggcaacaacgtttcc
gaacgcgttgtcaaccagctcctgaccgaactcgacgggctcgaagagatgggcaacgtg
atggtgatcggcgcgaccaaccggccggatatgatcgatcccgccctgattcggtcgggt
cgatttgatcggttggtgatgatcggccagcccgacgaagaaggccgcgagcagatcctc
cgcatccacacgggtgacacgccgcttgcgccggatgtgagtctgcgagagatcgccgag
atcaccgacggctacgtcggctctgatctcgaatccatcgcccgcgagtcggctatcgag
gcgcttcgggacgatgacgacgcgaccgaggtcgagatgcagcacttccggagagcgatg
gagtcggtgcgaccgactgtcactgaggaaatcctcagctactacgaggatatcgaagat
cagttccgtggcggcggcggccgcgaacagctcggcgagcgccgcgacggccggatcggc
ttccaataa
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